Gene Information

Name : Geoth_0006 (Geoth_0006)
Accession : YP_004589844.1
Strain :
Genome accession: NC_015661
Putative virulence/resistance : Resistance
Product : XRE family transcriptional regulator
Function : -
COG functional category : K : Transcription
COG ID : COG3655
EC number : -
Position : 5168 - 5380 bp
Length : 213 bp
Strand : +
Note : KEGG: dae:Dtox_0844 putative transcriptional regulator, XRE family

DNA sequence :
ATGATCAGCTATAAACCATTGCTAAAGTTGTTAATTGATCGCGGTATAAAGAAACAGGATCTACAGAAAGCAGCCAATAT
ATCATGGTCTACAATGGCCAAGTTCAACAAAGGTGAATATGTTTCTTTAGAGGTCATAGATCGAATCTGTGCTGTCCTTG
ACTGTCAACCTGGCGATCTTATTGAATATATACCTGATGAAAAAGAATCATAA

Protein sequence :
MISYKPLLKLLIDRGIKKQDLQKAANISWSTMAKFNKGEYVSLEVIDRICAVLDCQPGDLIEYIPDEKES

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cpfrc_01461 YP_003783861.1 hypothetical protein Not tested PiCp 5 Protein 1e-07 44
CpC231_1455 YP_005683818.1 hypothetical protein Not tested PiCp 5 Protein 9e-08 44
CpI19_1462 YP_005685904.1 hypothetical protein Not tested PiCp 5 Protein 9e-08 44
Cp1002_1456 YP_005681720.1 hypothetical protein Not tested PiCp 5 Protein 4e-07 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Geoth_0006 YP_004589844.1 XRE family transcriptional regulator DQ212986.1.gene3.p01 Protein 2e-09 49