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Name : Geoth_0907 (Geoth_0907) Accession : YP_004586986.1 Strain : Geobacillus thermoglucosidasius C56-YS93 Genome accession: NC_015660 Putative virulence/resistance : Unknown Product : DNA polymerase I Function : - COG functional category : L : Replication, recombination and repair COG ID : COG0749 EC number : - Position : 882969 - 885605 bp Length : 2637 bp Strand : + Note : TIGRFAM: DNA polymerase 1; PFAM: DNA-directed DNA polymerase, family A, palm domain; 5'-3' exonuclease, N-terminal resolvase-like domain; 5'-3' exonuclease, SAM-fold domain; KEGG: gmc:GY4MC1_0838 DNA polymerase I; SMART: 5'-3' exonuclease, N-terminal; Hel DNA sequence : GTGTTGAAAAGGAAACTTGTACTTATTGATGGAAACAGTGTCGCATACCGCGCTTTTTTTGCGTTGCCGCTTTTACATAA CGATAAAGGGATTCATACGAATGCGGTGTATGGATTTACGATGATGTTAATGAAAATTTTAGAAGAAGAAAAGCCGACAC ATATGCTTGTTGCTTTCGATGCCGGGAAAACGACATTTCGTCATAAGACGTTCGAAGAGTATAAAGGCGGGCGGCAAAAG ACGCCTCCGGAATTATCCGAGCAGTTTCCGTTATTGCGGGAATTGCTAAATGCGTACCAAATTCGTTTTTACGAGTTGGA AAATTACGAAGCGGATGATATTATCGGCACATTGTGCGCAAAAGCGGAAAACGAAGGATTTGAAGTAAAAGTGATTTCCG GAGACCGCGATTTAACGCAGCTTGTTTCTGATCATGTAACGGTAGATATTACGAAAAAGGGCATTACCGATGTCGAGTCA TATACTCCGGAGACGGTGCGGGAGAAATACGGATTGGCGCCACAACAAATCATCGATTTAAAAGGGCTGATGGGAGACAA ATCCGATAATATTCCGGGCGTGCCGGGAATTGGCGAAAAAACGGCATTAAAGCTGTTAAAAGAGTTTGGCTCCATTGAAA ACATATTAGACTCGATCGAGCAAATAAGCGGGAATAAACTGAAAGAAAATTTGGAGAAGCACCGCGATCTTGCTTTAATG AGCAAACAGCTGGCGACCATTTTGCGCGACGCCCCGATTGATCTTTCGTTTGAAGATATAGAATATCGCGGATATGATGT GGACAAAGTGATTGCTTTATTTAAAGAGCTTAGTTTTAACTCGCTGCTTGGCAAAATGGCGCCGCAAGAAGAGGAAAAAA CGGCGGTGGCCTTGCCGGAAATCGGTTATAAGATTGTCGACGAGGTGACGGAAGCAATTTTGTCCGACGAGGCGGCCCTC GTTGTCGAAGTGTTGGAATCCAACTATCATAAAGCGCCGATTTTAGGCTTTGCGATCGCAAATGAGCATGGAAACTTTTT TATCCGGACAGATACGGCGCTGTCGTCTTCTTTGTTTACAACATGGCTTGAAGATGAGTCAAAGAAAAAAAGCGTTTTTG ACGGCAAGCGGGCAATCGTTTCTTTAAAATGGCAAGGAGTGCATCTGCGCGGCATTCAGTTTGATTTATTAATCGCTTCC TATTTGTTAAACCCATCCCAATCGACCGAAGACGTCGCTTCCATTGCGAAAACGAAGCAATATGTGGGCGTCCAATCAGA TGAAGCAGTATACGGAAAAGGTGCGAAGCAAAAAGTACCGGATGAACAAGTTTTAGCAGAGCATCTCGTGCGCAAAGCGG CGGCGATACGCGCATTAGAACAGGGTTTTATTCACGATTTGCAAGAAAACGAGCAATATTCTCTATTCACGGATTTGGAA CTGCCGCTTTCCACCATTCTCGCGGAGATGGAGTTTGCCGGTGTGAAAGTCGATGTCGAGCGGCTAAAAGAAATGGGGGA AGAATTGGCAGAACAGCTGAAAGAAGTGGAGCAAGAAATTTACCGCTTAGCTGGCCAAGAGTTCAACATCAATTCGCCGA AACAGTTAGGCGTCATTTTATTTGAAAAGCTGCAACTGCCTGTATTGAAAAAAACGAAAACAGGCTATTCGACATCGGCG GAAGTGCTGGAAAAACTTGCTCCGCAACATGAAATCGTCGAGAAAATTTTGCATTATCGCCAATTAGGAAAACTGCAATC GACGTATATCGAAGGGCTGTTAAAGGTCGTGCATCGCGACACGAATAAAGTGCACACGATTTTTAACCAAGCGCTGACCC AGACAGGGCGGCTAAGCTCTACAGAACCAAATTTGCAAAACATCCCGATTCGTTTAGAAGAAGGGAGAAAAATCCGCCAG GCGTTCATCCCGTCAGAGCCGGATTGGGTCATTTTTTCCGCGGATTATTCGCAAATTGAACTGCGTGTGCTTGCCCATAT CGCCAATGATGAAAATTTAATTGACGCGTTCCGCCATGGTTTGGATATTCATACGAAAACGGCGATGGATATTTTTCATG TGAGCAAAGAGGAAGTGACGCCGAACATGCGCCGGCAGGCAAAAGCAGTAAACTTCGGCATCGTGTACGGCATTAGCGAT TACGGATTATCGCAAAACTTAAACATTACAAGAAAAGAAGCAGCTGAATTCATTAAGCGATATTTTGAGATTTTTCCAGG AGTAAAGCAATATATGAAGGATATCGTCCAAGAGGCGAAACAAAAAGGCTATGTGACTACGCTTCTGCACCGCCGCCGTT ATTTGCCGGATATTACAAGCCGGAACTTTAATTTGCGCAGCTTTGCGGAACGGACGGCGATGAATACGCCGATTCAAGGA AGCGCCGCCGACATTATAAAAAAAGCGATGATTGATTTATCGAAGCGGCTGCAAAAAGAAAACATGAAAGCACGCATGTT ACTGCAAGTGCATGACGAGCTCATTTTGGAGGCGCCGAAAGACGAAATAGAACGGTTGCAACAAATTGTACCGGAAGTCA TGGAAAATGCGGTGCAACTGCGGGTGCCGCTTAAAGTCGATTACCATTTTGGTCCGACATGGTATGACGCCAAGTAA Protein sequence : MLKRKLVLIDGNSVAYRAFFALPLLHNDKGIHTNAVYGFTMMLMKILEEEKPTHMLVAFDAGKTTFRHKTFEEYKGGRQK TPPELSEQFPLLRELLNAYQIRFYELENYEADDIIGTLCAKAENEGFEVKVISGDRDLTQLVSDHVTVDITKKGITDVES YTPETVREKYGLAPQQIIDLKGLMGDKSDNIPGVPGIGEKTALKLLKEFGSIENILDSIEQISGNKLKENLEKHRDLALM SKQLATILRDAPIDLSFEDIEYRGYDVDKVIALFKELSFNSLLGKMAPQEEEKTAVALPEIGYKIVDEVTEAILSDEAAL VVEVLESNYHKAPILGFAIANEHGNFFIRTDTALSSSLFTTWLEDESKKKSVFDGKRAIVSLKWQGVHLRGIQFDLLIAS YLLNPSQSTEDVASIAKTKQYVGVQSDEAVYGKGAKQKVPDEQVLAEHLVRKAAAIRALEQGFIHDLQENEQYSLFTDLE LPLSTILAEMEFAGVKVDVERLKEMGEELAEQLKEVEQEIYRLAGQEFNINSPKQLGVILFEKLQLPVLKKTKTGYSTSA EVLEKLAPQHEIVEKILHYRQLGKLQSTYIEGLLKVVHRDTNKVHTIFNQALTQTGRLSSTEPNLQNIPIRLEEGRKIRQ AFIPSEPDWVIFSADYSQIELRVLAHIANDENLIDAFRHGLDIHTKTAMDIFHVSKEEVTPNMRRQAKAVNFGIVYGISD YGLSQNLNITRKEAAEFIKRYFEIFPGVKQYMKDIVQEAKQKGYVTTLLHRRRYLPDITSRNFNLRSFAERTAMNTPIQG SAADIIKKAMIDLSKRLQKENMKARMLLQVHDELILEAPKDEIERLQQIVPEVMENAVQLRVPLKVDYHFGPTWYDAK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| polA | YP_281523.1 | DNA polymerase I | Not tested | Not named | Protein | 0.0 | 53 |
