Gene Information

Name : Geoth_0548 (Geoth_0548)
Accession : YP_004586640.1
Strain : Geobacillus thermoglucosidasius C56-YS93
Genome accession: NC_015660
Putative virulence/resistance : Virulence
Product : iron-chelate-transporting ATPase
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG4604
EC number : 3.6.3.34
Position : 558392 - 559150 bp
Length : 759 bp
Strand : +
Note : PFAM: ABC transporter-like; KEGG: gmc:GY4MC1_0480 ABC transporter related protein; SMART: ATPase, AAA+ type, core

DNA sequence : 
ATGGTAGAAGTAAGAGGGGTTTATAAGCAATACGGTGGAAAAAACGTCGTTGACAACGTGTCGATTACGATCCCGACTGG
AAAATTAACATCGCTCATTGGGCCGAACGGTGCGGGAAAAAGCACGCTGTTATCGATTATGAGCCGTCTTATCGATAAAG
ACCGCGGCGAAGTCAGAATTGAAGGAAAAGAAATTAGCCAATATAAAAGCGATGAATTGGCGAAAAAGATCTCCATTTTA
AAACAATCAAACCATATTGCAATCCGGCTGACGGTGAAAGAACTCGTTTCTTTTGGACGGTTCCCGTATTCACGCGGCAG
ACTGACGCGCGAAGACTGGGAGTATGTCAAAGAAGCGATTCGGTATATGGAGCTGGAGGACTTGCAAGATTGTTATTTGA
ACGAATTGAGCGGCGGGCAAAGACAGCGCGCGTATATTGCCATGGTGCTCGCGCAAGATACAGACTACATTTTTCTCGAT
GAGCCGTTAAACAATTTAGATATGAAACATTGTGTGCAAATGATGAAAGTATTGCGAAAATTGGTGGATGAACTTGGAAA
AACGATCGTCGTTGTCATGCACGACATTAATTTTGCGTCCTGTTATTCTGATTATATTGTTGCCCTTAAAAACGGGAAAG
TGGTTCGCGAGGGAACAGCATCAGAAATTATGAGCAGCGGCGTATTGCAAGGCATTTATGATATGGACGTTCATATTGAA
ACGATCCATGATAAGAAAATATGTGTTTATTTTGCATAA

Protein sequence : 
MVEVRGVYKQYGGKNVVDNVSITIPTGKLTSLIGPNGAGKSTLLSIMSRLIDKDRGEVRIEGKEISQYKSDELAKKISIL
KQSNHIAIRLTVKELVSFGRFPYSRGRLTREDWEYVKEAIRYMELEDLQDCYLNELSGGQRQRAYIAMVLAQDTDYIFLD
EPLNNLDMKHCVQMMKVLRKLVDELGKTIVVVMHDINFASCYSDYIVALKNGKVVREGTASEIMSSGVLQGIYDMDVHIE
TIHDKKICVYFA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
fecE AAL08451.1 ATP-binding protein FecE Virulence SRL Protein 2e-41 43
iusE YP_005143742.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 3e-39 42
SPN23F_09560 YP_002510939.1 ferric siderophore ABC transporter ATP-binding protein Virulence PPI-1 Protein 3e-40 42
SP_1035 NP_345510.1 iron-compound ABC transporter ATP-binding protein Not tested PPI-1 Protein 3e-40 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Geoth_0548 YP_004586640.1 iron-chelate-transporting ATPase BAC0164 Protein 1e-41 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Geoth_0548 YP_004586640.1 iron-chelate-transporting ATPase VFG1042 Protein 1e-41 43
Geoth_0548 YP_004586640.1 iron-chelate-transporting ATPase VFG0925 Protein 2e-39 41