Gene Information

Name : Geoth_3932 (Geoth_3932)
Accession : YP_004589821.1
Strain : Geobacillus thermoglucosidasius C56-YS93
Genome accession: NC_015660
Putative virulence/resistance : Unknown
Product : single-strand binding protein
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG0629
EC number : -
Position : 3877249 - 3877743 bp
Length : 495 bp
Strand : -
Note : KEGG: gmc:GY4MC1_3823 single-strand binding protein; TIGRFAM: Single-strand DNA-binding; PFAM: Primosome PriB/single-strand DNA-binding

DNA sequence :
ATGATTAATCGCGTAATTCTTGTGGGAAGGCTGACGAGAGATCCGGAATTACGCTATACTCCAAGTGGGGTGGCTGTTGC
TACATTTACGCTTGCTGTCAACCGCCCGTTTACAAACCAGCAAGGTGAACGGGAAACGGATTTTATTAACTGCGTCGTTT
GGCGGCGCCAGGCGGAAAATGTCGCGAATTTCTTGAAAAAGGGAAGTTTAGCCGGAGTAGACGGTCGTTTGCAAACCCGC
AGCTATGAAGGTCAAGATGGCAGACGTGTGTATGTGACGGAAGTGGTTGCTGATAGCGTCCAATTTCTTGAGCCGAAAAG
TAGCACTGAACAGCGTGGCACGGCAGCAGGCGGCTATTATGGGGAGCCATTCCCATTTGGACAAAATCAGAACCATCGCA
ACCCAAATGAAAATGATTTTAGTCGCATAGATGAAGATCCTTTTGCAAACGATGGACAACCGATCGATATTTCAGACGAT
GATTTGCCGTTTTAA

Protein sequence :
MINRVILVGRLTRDPELRYTPSGVAVATFTLAVNRPFTNQQGERETDFINCVVWRRQAENVANFLKKGSLAGVDGRLQTR
SYEGQDGRRVYVTEVVADSVQFLEPKSSTEQRGTAAGGYYGEPFPFGQNQNHRNPNENDFSRIDEDPFANDGQPIDISDD
DLPF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SAV1983 NP_372507.1 single-strand DNA-binding protein Not tested ¥ÕSa3 Protein 9e-41 59
SA1792 NP_375091.1 single-strand DNA-binding protein Not tested ¥ÕSa3 Protein 8e-41 59
SAKOR_01963 YP_008492151.1 Single-strand DNA binding protein Not tested ¥ÕSa3 Protein 4e-41 59
MW1921 NP_646738.1 single-strand DNA-binding protein Not tested ¥ÕSa3 Protein 6e-40 59
SAUSA300_1958 YP_494609.1 single-strand binding protein Not tested ¥ÕSa3 Protein 1e-40 58
SAUSA300_1958 YP_494609.1 single-strand binding protein Not tested ¥ÕSa3 Protein 1e-40 58
ef0020 AAM75226.1 EF0020 Not tested Not named Protein 9e-38 54
ssb-2 NP_814280.1 single-strand binding protein Not tested Not named Protein 1e-37 54