Gene Information

Name : Geoth_3498 (Geoth_3498)
Accession : YP_004589429.1
Strain : Geobacillus thermoglucosidasius C56-YS93
Genome accession: NC_015660
Putative virulence/resistance : Unknown
Product : phosphomethylpyrimidine synthase
Function : -
COG functional category : H : Coenzyme transport and metabolism
COG ID : COG0422
EC number : -
Position : 3417885 - 3419606 bp
Length : 1722 bp
Strand : -
Note : TIGRFAM: Thiamine biosynthesis protein ThiC; HAMAP: Thiamine biosynthesis protein ThiC; KEGG: gmc:GY4MC1_3407 thiamine biosynthesis protein ThiC; PFAM: Thiamine biosynthesis protein ThiC

DNA sequence :
ATGCAAAACATCGCCTCTTTCATGCAATTCCCAGCCAGCAAAAAGGTGTACATTGAAGGTTCCCGGCCGGATATTCGCGT
TCCGATGAGGGAAATTGCGTTAAGTCCGACGAAGACGGAAACAGGAATCATGGAAAATGAACCTGTTCGCGTTTATGACA
CAAGCGGGCCATACACGGATCCGGATTTTCAGCCAGACATTCAAAAAGGATTGCCGCCGCTGAGAAAACGCTGGATTTTA
GAAAGAGGAGACGTGGAAGAATATGAAGGCCGCCCGGTGAAACCGGAAGATAACGGATTCCGCCACGGGCAGTACTCAGA
AGTGATGCTGCCTTTCAAGAGAAAACCGCTGCGCGCTAAAAAAGGAAAAACCGTTACGCAAATGCATTACGCAAAACAGG
GAATTATTACGCCGGAGATGGAGTTTGTTGCGATTCGCGAAAATATAGATCCGGAAATCGTGCGGCAAGAAGTTGCGGCA
GGCAGAGCGATTATTCCCGCGAATATTAACCATCCGGAAAGCGAGCCGATGATTATCGGAAGCCGCTTTCACGTTAAAAT
TAACGCGAATATTGGCAATTCTGCAGTAACATCGTCCATTGAAGAAGAAGTCGAAAAAATGCTGTGGGCGGTGCGCTGGG
GCGCTGATACGATTATGGACTTGTCAACAGGAAAGCATATTCATGCCACAAGAGAATACATTATTCGCAACTCGCCTGTG
CCTGTCGGGACAGTTCCGATTTATCAGGCGCTTGAAAAAGTCAATGGCGTCGTCGAAGATTTAACATGGGAGATTTACCG
CGACACGCTTATCGAACAAGCAGAACAAGGAGTCGACTATTTTACCATTCACGCGGGGGTATTGCTTCGCTACATACCGT
TGACGGTAAACCGGACAACCGGCATCGTTTCGCGCGGCGGCTCGATTATGGCGCAATGGTGTTTGGCCCACCATGAAGAA
AATTTTTTATATACGCATTTTGAAGAAATATGCGAGATTTTGAAAACGTATGATATTGCCGTATCGCTTGGAGACGGGCT
GCGCCCGGGCTCAATTGCCGATGCGAACGACGAAGCGCAGTTTGCCGAATTGGAGACGCTTGGGGAATTAACGGAAATCG
CTTGGAAGCATGATGTACAAGTAATGATTGAAGGCCCGGGGCATGTGCCGATGCATAAAATTAAAGAAAACGTCGAAAAA
CAAGTGGAAATTTGTAAAGGGGCACCGTTTTACACATTGGGGCCGCTTACGACCGATATTGCTCCTGGTTATGACCATAT
TACATCCGCAATCGGGGCGGCGCTCATCGGCGCATACGGAACCGCGATGCTTTGTTACGTGACGCCGAAAGAGCATTTAG
GGCTGCCAAACAAAGAAGATGTGCGCAAAGGGGTAATCGCTTACAAAATCGCCGCCCATGCCGCCGATTTGGCAAAAGGG
CATCCTGGAGCGCAACAGCGCGATGATGCGTTATCGAAAGCGCGCTTTGAGTTTCGCTGGAACGACCAGTTCAATCTTTC
GCTTGACCCGGACCGGGCGCGGGAATATCATGATGAAACATTGCCGGCTGAGGCGGCGAAAGTCGCACATTTTTGCTCCA
TGTGCGGACCAAAGTTTTGTTCGATGAAAATCTCGCATGATTTGCAACGGGCGGTCAAAGAAGAAGGGATGAAACAAAAA
GCGAAGGAGTTTGTCGAAAATGGCTCATCCCTCTATCGATAA

Protein sequence :
MQNIASFMQFPASKKVYIEGSRPDIRVPMREIALSPTKTETGIMENEPVRVYDTSGPYTDPDFQPDIQKGLPPLRKRWIL
ERGDVEEYEGRPVKPEDNGFRHGQYSEVMLPFKRKPLRAKKGKTVTQMHYAKQGIITPEMEFVAIRENIDPEIVRQEVAA
GRAIIPANINHPESEPMIIGSRFHVKINANIGNSAVTSSIEEEVEKMLWAVRWGADTIMDLSTGKHIHATREYIIRNSPV
PVGTVPIYQALEKVNGVVEDLTWEIYRDTLIEQAEQGVDYFTIHAGVLLRYIPLTVNRTTGIVSRGGSIMAQWCLAHHEE
NFLYTHFEEICEILKTYDIAVSLGDGLRPGSIADANDEAQFAELETLGELTEIAWKHDVQVMIEGPGHVPMHKIKENVEK
QVEICKGAPFYTLGPLTTDIAPGYDHITSAIGAALIGAYGTAMLCYVTPKEHLGLPNKEDVRKGVIAYKIAAHAADLAKG
HPGAQQRDDALSKARFEFRWNDQFNLSLDPDRAREYHDETLPAEAAKVAHFCSMCGPKFCSMKISHDLQRAVKEEGMKQK
AKEFVENGSSLYR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00317 YP_008207782.1 Thiamine biosynthesis protein ThiC Not tested AbaR25 Protein 0.0 71
BJAB0868_00321 YP_008211647.1 Thiamine biosynthesis protein ThiC Not tested AbaR26 Protein 0.0 71
thiC YP_001598318.1 thiamine biosynthesis protein ThiC Not tested MDA Protein 0.0 66