Gene Information

Name : Geoth_3009 (Geoth_3009)
Accession : YP_004588965.1
Strain : Geobacillus thermoglucosidasius C56-YS93
Genome accession: NC_015660
Putative virulence/resistance : Resistance
Product : Cys/Met metabolism pyridoxal-phosphate-dependent protein
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG0626
EC number : -
Position : 2936507 - 2937685 bp
Length : 1179 bp
Strand : -
Note : PFAM: Cys/Met metabolism, pyridoxal phosphate-dependent enzyme; KEGG: gmc:GY4MC1_2991 Cys/Met metabolism pyridoxal-phosphate-dependent protein

DNA sequence :
ATGGAACAACGCGTCTCTTTTCAAACGAAACTGCTCCATAACAAATGGAAAACGGACCCGCAAACGGGGGCAGTCAGCGT
GCCGATCCAGCACGCTTCCACGTTCCATCAATTTGATTTTGACACATTCGGCAAGTATGATTACAGCCGCTCGGGCAATC
CGACGCGTGAAGCGCTGGAAGAAACGATCGCAGCGTTAGAAGGCGGGGTGCGCGGCTTTGCCTTCTCATCCGGAATGGCG
GCAATTTCCACCGCTTTTCTCCTTCTGTCCAAAGGGGATCATGTGCTTGTGACGGAAGACGTTTATGGCGGCACGTACCG
CATGATTACCGAAGTATTGAGCCGTTTTGGCATTGAATATACGTTTGTCGATATGACCGATTTGCATGAAGTGGCGTCCC
ATATCCGCCCGAACACCAAAGTCATTTACGTCGAAACGCCATCGAATCCGCTTTTAAAAGTGACGGATATTCGCGGCATC
GTTAAGCTGGCAAAAGCAAACGGATGTTTAACGTTTTTGGATAATACGTTTATGACTCCCGCGCTGCAGCGCCCGCTTGA
TCTCGGTGTCGATGTCGTTCTCCACAGTGCGACGAAATTTTTGGCAGGGCATAGCGACGTCGTTGCCGGCCTTGCTGTTG
TCAAAGACGAGGAGCTTGCGAAACAGCTGTACAAATTGCAAAACGCTTTTGGGGCGGTGCTGGGCGTGCAAGATGCATGG
CTCGTGCTGCGCGGGCTGAAAACCCTGCACGTCCGCCTCAAGCAGTCGTCGGAATCCGCGTTCGCTATCGCCCGCTATTT
AGCCAGCCATCCGAAAGTGGAAGAAGTGTTTTACCCGGGGCTCACGCACCATCCCGGCCATTCGGTCCAGCGCTATCAAG
CCTCCGGATTTGGCGCGGTGCTGTCGTTTCGCCTTGCCGATGAAGAAGCGGCCCGGACGTTTGTAAAACATGTCCGCATC
CCGGTATTTGCCGTCAGCTTAGGTGCAGTCGAATCGATTTTATCATATCCTGCCAAAATGTCGCATGCGGCAATGCCAAA
GGAAGAACGGGAGCGGCGCGGCATCACGGACGGCCTGCTGCGCCTCAGCGTCGGGCTTGAAGCCACGGACGATTTAATCG
CCGATTTCGAGCAAGCCTTATCCCATGTCAAAGAAACACCGGCCGTTTCTGCCCGTTAA

Protein sequence :
MEQRVSFQTKLLHNKWKTDPQTGAVSVPIQHASTFHQFDFDTFGKYDYSRSGNPTREALEETIAALEGGVRGFAFSSGMA
AISTAFLLLSKGDHVLVTEDVYGGTYRMITEVLSRFGIEYTFVDMTDLHEVASHIRPNTKVIYVETPSNPLLKVTDIRGI
VKLAKANGCLTFLDNTFMTPALQRPLDLGVDVVLHSATKFLAGHSDVVAGLAVVKDEELAKQLYKLQNAFGAVLGVQDAW
LVLRGLKTLHVRLKQSSESAFAIARYLASHPKVEEVFYPGLTHHPGHSVQRYQASGFGAVLSFRLADEEAARTFVKHVRI
PVFAVSLGAVESILSYPAKMSHAAMPKEERERRGITDGLLRLSVGLEATDDLIADFEQALSHVKETPAVSAR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
metB YP_281510.1 cystathionine beta-lyase Not tested Not named Protein 6e-87 54
SAS0418 YP_042545.1 Cys/Met metabolism PLP-dependent enzyme Not tested vSa¥á Protein 1e-86 51
SAR0460 YP_039909.1 Cys/Met metabolism PLP-dependent enzyme Not tested vSa¥á Protein 2e-85 50

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Geoth_3009 YP_004588965.1 Cys/Met metabolism pyridoxal-phosphate-dependent protein BAC0207 Protein 1e-62 41