Gene Information

Name : Geoth_2964 (Geoth_2964)
Accession : YP_004588926.1
Strain : Geobacillus thermoglucosidasius C56-YS93
Genome accession: NC_015660
Putative virulence/resistance : Resistance
Product : sodium solute transporter superfamily protein
Function : -
COG functional category : R : General function prediction only
COG ID : COG4147
EC number : -
Position : 2892609 - 2894150 bp
Length : 1542 bp
Strand : +
Note : KEGG: gmc:GY4MC1_2939 SSS sodium solute transporter superfamily; TIGRFAM: Sodium/solute symporter, subgroup; PFAM: Sodium/solute symporter

DNA sequence :
ATGCACGGGTTAGCCTTTTTCCTCTTCTTGATCATTGTGGCGCTGACGCTTGTCATCACGTACTTCGCTTCGAAACGGAC
GAGAACAACGAGCGAGTTTTATACAGCAGATAGCAGCTTAACCGGCTGGCAAAACGGGCTGGCAATTGCCGGCGACTATA
TGTCCGCTGCTTCATTTTTAGGAATTGCCGGCATGATCGCACTGGCTGGTTTTGACGGTTTCTTTTATAGTATTGGCTTC
CTTGTTGCATATTTAGTCGTTCTTTACATTGTCGCAGAACCGCTGCGTAACCTTGGCAAATATACGATGGCGGACATGAT
TGCCGCCCGATTCTCCGACAAAAAAGTGCGCGGGGTCGCAGCGCTTAATACGATCGCCATCTCCATTTTCTACATGATTG
CTCAACTTGTCGGTGCCGGAGGCCTTATTAAGCTATTATTAGGGATTGATTATATTTACTCTGTCCTCATTGTCGGCATC
CTCATGACCGTTTACGTCGTTTTTGGCGGCATGATGGCGACGAGCTGGGTACAAATTGTAAAAGCGGTATTATTAATGGT
CGGTACGTTTATTATTTCCTTTATCGTCTTTGCAAAATTTGATTTCAGCCTCACCAAAATGTTTAATGAAGTTAAAACAG
CCACGCCGCTTGGTGAAGCGTTCCTCAATCCTGGCAATAAATTTAAAGACCCGCTTGATACGATATCGCTGAATTTAGCG
CTTATCCTAGGAACAGCAGGACTTCCACATATTTTAATCCGCTTCTTTACAGTAAAAGATGCACCAACTGCTCGCAAATC
GGTCGTTCATGCAACATGGATTATCGGAATTTTTTACGTTTTAACGATTTTCTTAGGGTTTGGAGCCGCGGCATTCGTTG
GTTATGACAAAATTGTCGCCGCAAACCCTGCCGGAAACATGGCCGCTCCATTATTGGCGGAAGCGCTCGGCGGCGATTTC
CTGTTCGCGTTTATATCTGCAGTCGCGTTTGCCACCATTTTAGCTGTTGTGGCGGGACTTGTGCTGTCAGCCGCATCGGC
GTTCGCCCATGACTTTTACAGCCATATTCTTCGCCGCGGCGAAGCAACAGAAAGGGAGCAAATGGTTGCGGCGCGCTTTG
CTTCTGTCGGCGTATCGATTTTGTCCATTCTTTTAGCGTTGTTCGCCCAAAAAATGAATGTCGCTTTCCTTGTCTCATTG
GCATTCGCCGTTGCCGCAAGCGCCAATTTGCCGATTATTGTATTAACGATTTTCTGGCGCCGCTTTAATACAACAGGCGC
TATTGCCGGAATGCTCGTCGGGCTGTTCAGCGCGTTATTGCTCGTGTTCTTTAGTCCGAACGTTTGGGCGCCGGAACCGG
GAGTAGCGATTCTTGTCGGCGAACCGCTCTTTAAGCTGGCCAACCCTGGCATTGTTTCCATCCCATTAGGATTCATCGCG
GCGATTGTCGGCACACTTCTTTCCTCGAAAAAAGCCGATAGCAAGAAATTTGATGAAATTCTTGTGAAAGCGAATACAGG
AATAAAAGAATTGGCAAACTAA

Protein sequence :
MHGLAFFLFLIIVALTLVITYFASKRTRTTSEFYTADSSLTGWQNGLAIAGDYMSAASFLGIAGMIALAGFDGFFYSIGF
LVAYLVVLYIVAEPLRNLGKYTMADMIAARFSDKKVRGVAALNTIAISIFYMIAQLVGAGGLIKLLLGIDYIYSVLIVGI
LMTVYVVFGGMMATSWVQIVKAVLLMVGTFIISFIVFAKFDFSLTKMFNEVKTATPLGEAFLNPGNKFKDPLDTISLNLA
LILGTAGLPHILIRFFTVKDAPTARKSVVHATWIIGIFYVLTIFLGFGAAAFVGYDKIVAANPAGNMAAPLLAEALGGDF
LFAFISAVAFATILAVVAGLVLSAASAFAHDFYSHILRRGEATEREQMVAARFASVGVSILSILLALFAQKMNVAFLVSL
AFAVAASANLPIIVLTIFWRRFNTTGAIAGMLVGLFSALLLVFFSPNVWAPEPGVAILVGEPLFKLANPGIVSIPLGFIA
AIVGTLLSSKKADSKKFDEILVKANTGIKELAN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cur_1523 YP_001800917.1 transporter Not tested Not named Protein 7e-73 51
unnamed AAK01502.1 putative amino acid transport protein Not tested PAGI-1 Protein 4e-73 46

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Geoth_2964 YP_004588926.1 sodium solute transporter superfamily protein BAC0570 Protein 7e-69 49
Geoth_2964 YP_004588926.1 sodium solute transporter superfamily protein BAC0564 Protein 1e-72 48