Gene Information

Name : Geoth_2924 (Geoth_2924)
Accession : YP_004588889.1
Strain : Geobacillus thermoglucosidasius C56-YS93
Genome accession: NC_015660
Putative virulence/resistance : Virulence
Product : ATPase AAA-2 domain-containing protein
Function : -
COG functional category : O : Posttranslational modification, protein turnover, chaperones
COG ID : COG0542
EC number : -
Position : 2849274 - 2851436 bp
Length : 2163 bp
Strand : +
Note : KEGG: gmc:GY4MC1_2899 ATPase AAA-2 domain protein; PFAM: ATPase associated with various cellular activities, AAA-2; ATPase, AAA-type, core; UvrB/UvrC protein; Clp ATPase, C-terminal; SMART: ATPase, AAA+ type, core

DNA sequence :
ATGCTTTGCCAAGTATGCCAACAAAACGAAGCAACAGTATTTGTCAACTTGCAATTTAACCATGAGAAAAAACAAATGCA
TCTTTGCCATGAATGTTATGAAAAACAAAAACAAGAGCTTTCCATCCCAATGAACTTCGGGTTTGGAGGCTTTTCGTCAT
TCCCGTTTGATGATTTCTTTATGGATGGATTTTCGCCAATTTCGGAAATGGGAGCGCCACAGCCAAACACCGCACAGCCA
TCGCACCGCAACAGAAAAGGCGGCGGCTTCCTTGATCAATTTGGCCGCAACTTAACGCAACTGGCGAAAGCAGGTCTCAT
TGATCCAGTCATCGGCCGCGATAAAGAAATCGAACGCGTCATCGAAATTTTAAACCGCCGCAATAAAAACAACCCGGTAT
TAATCGGGGAACCTGGCGTCGGGAAAACGGCGATCGTCGAAGGACTTGCCTTGAAAATTGCCGAAGGACAAGTTCCGGAA
AAACTGTTAAATAAAGAAGTGTATTTGCTTGACGTCGCTTCGCTTGTCGCCAACACGGGCATTCGCGGGCAATTTGAAGA
GCGCATGAAACGTCTTATCGCTGAACTGCAACAACGCAAAAACGTCATTCTCTTCATCGACGAAATTCACTTGCTCGTCG
GCGCCGGTTCGGCGGAAGGTTCAATGGACGCTGGCAACATTTTAAAACCTGCGCTGGCCCGCGGCGAATTGCAAGTCGTC
GGTGCGACAACATTGAAAGAATACCGACAAATTGAAAAAGACGCCGCGCTTGAACGCCGCTTCCAACCAGTGATCGTCCA
TGAGCCGACCGTCGAACAAGCAATCACGATTTTAAAAGGCATCCAGCCGAAATATGAGCAATTCCACCATGTCAAATATA
CGGATGAAGCGATTAAAGCATGCGTCAAATTGTCACACCGCTACATTCAAGACCGCTTCTTGCCGGACAAAGCGATCGAC
TTGTTAGACGAAGCCGGCTCAAAAGCAAACTTGCGCATCGGTCCGACAGATGAAAAACAAATTCAAGAGCGCCTTGCGCA
AATCGCTAAAGAAAAAACAAAAGCAGTGAACGAAGAAAATTTCGAACTGGCAGCGAAATTGCGCGATGAAGAGCTGAAAT
TAGAAAAACAACTGCAAAACGGTGTAAATCAAGAGCGCCCTGTTGTCGATGTTGCCGATATCCAACGCATCATCGAAGAA
AAAACAGGCATTCCTGTCGGCAAACTGCAAGCTGATGAAAAAGAAAAAATGAAACATTTAGAAGAAAACTTGGCGAAAAA
AGTGATTGGCCAAGAAGAAGCGGTGAAAAAAGTGGCGAAAGCGATCCGCCGCAGCCGCGCGGGATTAAAAGCAAAACATC
GCCCAATCGGTTCATTCTTATTCGTCGGTCCGACCGGCGTCGGAAAAACAGAGCTGGCGAAAACGCTCGCCGAAGAATTG
TTCGGCTCGAAAGACGCAATGATTCGCCTCGATATGAGCGAATATATGGAAAAACATTCGGTATCGAAATTAATCGGTTC
ACCTCCGGGCTATGTCGGTTTTGAGGAAGCCGGCCAGCTAACGGAAAAAGTGCGCCGCAATCCATACAGCATCATCTTGC
TTGACGAAATTGAAAAAGCGCACCCGGACGTGCAGCACATCTTCCTGCAAATTTTAGAGGACGGCCGTCTCACTGACAGC
CAAGGCCGCACCGTTAGCTTTAAAGACACGGTCATCATCGCGACAAGCAACGCCGGTGTTACCGATAAAAAAATTACGGT
TGGATTCGAAAAACAAGGAACAACGCACACAAGCGTTCTTGAGTCATTAAACGCCTACTTCAAGCCGGAATTTTTGAACC
GTTTCGATGCGATCATCGAATTCAAACCGCTACAAAAAGAACATATGTTGCAAATCGTCGATCTGATGCTCCATGAAGTA
AAAGCGACATTGCGCGAACAACACATCGACCTTGACGTAACGCCAGCAGCGAAAGAAAAATTGGCGGAACTCGGCTATCA
TCCAGCGTTCGGTGCCCGTCCGCTCCGCCGCGTCATCCAAGAACATGTCGAAGACAAAATCGCCGACGTCTTGCTTGATG
AAAACGATCAAGTACAAGCGCTTCGCATCGATGTCGAAAATGACGCGATTGTCGCAAAAGCTTTGCATAAACAAACCGCC
TGA

Protein sequence :
MLCQVCQQNEATVFVNLQFNHEKKQMHLCHECYEKQKQELSIPMNFGFGGFSSFPFDDFFMDGFSPISEMGAPQPNTAQP
SHRNRKGGGFLDQFGRNLTQLAKAGLIDPVIGRDKEIERVIEILNRRNKNNPVLIGEPGVGKTAIVEGLALKIAEGQVPE
KLLNKEVYLLDVASLVANTGIRGQFEERMKRLIAELQQRKNVILFIDEIHLLVGAGSAEGSMDAGNILKPALARGELQVV
GATTLKEYRQIEKDAALERRFQPVIVHEPTVEQAITILKGIQPKYEQFHHVKYTDEAIKACVKLSHRYIQDRFLPDKAID
LLDEAGSKANLRIGPTDEKQIQERLAQIAKEKTKAVNEENFELAAKLRDEELKLEKQLQNGVNQERPVVDVADIQRIIEE
KTGIPVGKLQADEKEKMKHLEENLAKKVIGQEEAVKKVAKAIRRSRAGLKAKHRPIGSFLFVGPTGVGKTELAKTLAEEL
FGSKDAMIRLDMSEYMEKHSVSKLIGSPPGYVGFEEAGQLTEKVRRNPYSIILLDEIEKAHPDVQHIFLQILEDGRLTDS
QGRTVSFKDTVIIATSNAGVTDKKITVGFEKQGTTHTSVLESLNAYFKPEFLNRFDAIIEFKPLQKEHMLQIVDLMLHEV
KATLREQHIDLDVTPAAKEKLAELGYHPAFGARPLRRVIQEHVEDKIADVLLDENDQVQALRIDVENDAIVAKALHKQTA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
clpC YP_005163377.1 ATP-dependent Clp protease ATP-binding subunit Not tested Not named Protein 2e-166 52

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Geoth_2924 YP_004588889.1 ATPase AAA-2 domain-containing protein VFG0080 Protein 0.0 65
Geoth_2924 YP_004588889.1 ATPase AAA-2 domain-containing protein VFG0079 Protein 1e-165 54