|
Name : Geoth_2736 (Geoth_2736) Accession : YP_004588705.1 Strain : Geobacillus thermoglucosidasius C56-YS93 Genome accession: NC_015660 Putative virulence/resistance : Resistance Product : ATP-dependent DNA helicase RecG Function : - COG functional category : L : Replication, recombination and repair COG ID : COG1200 EC number : - Position : 2666244 - 2668313 bp Length : 2070 bp Strand : - Note : TIGRFAM: DNA helicase, ATP-dependent, RecG; PFAM: DNA/RNA helicase, DEAD/DEAH box type, N-terminal; Nucleic acid binding, OB-fold, tRNA/helicase-type; DNA/RNA helicase, C-terminal; KEGG: gmc:GY4MC1_2723 ATP-dependent DNA helicase RecG; SMART: DEAD-like he DNA sequence : TTGGCGTTTCAGCTAATAGCCGTGAATCGTGAATTGCAACAACCCGTTACAGCAATAAAGGGAATTGGCGAAGAAACGAG TGAAGCGCTCCGGGAAATGGGGATTACCACCATTGAGGAATTGCTCATGCACGTTCCGTACCGCTATGAAGATTATGAAG TAAAAGATTTGGCGGAAGTGAAGCATGACGAAAAAGTAACGGTTGAAGGGAAGGTTTATAGCGAGCCTTCTCTTACATAT TATGCGAAAAAAAAATCACGCCTGGCGTTTCGCTTGCTTGTCGGGCGGTATTTAATTACCGTCGTTTGCTTCAACCGTCC TTATTTAAAGCAAAAATTATCCATCAACGATACGGTTACGGTCAGCGGAAAATGGGACCGGCACCGCCAAACGATCACAG CCAATGAATTGAAAATGGGAGCACTGCCGCAAAAGCGGGAGTTGGAACCGGTTTATTCCGTCCGCGGATCTGTCACGGTG AAAGGAATGCGGCGTTTTATCCAGCTGGCTTTAACGCAATACGGTGAAGCCATTATCGATCCGCTTCCGTTGTCGATGCG GCAAACGTACCGGCTTATTTCGAAGCAAGAAGCGATTCGGGCCATCCATTTCCCGCGTTCCCATGAAGAATTGAAACAGG CGAGACGCCGGCTTGTATACGAAGAGTTTTTGCTTTTTCAATTGAAGATTCATGCGCTGCGCAAGGTGCAGAGGGAGCAT TCGCAAGGAATCGCTCACTCGTTTTCGCCGGAAAAATTGCATGATTTTATCGATCGGCTGCCATTTCCGCTGACAAAAGC GCAACAGCGCGTCGTTCGCGAAATATTAACAGATATGCAATCGCCGTACCGCATGAACCGTCTTCTGCAAGGAGATGTTG GTTCAGGGAAAACGGTCGTTGCCGCGATTGTATTATATGCCGCTGTTTTGTCCGGCTATCAAGGGGCGCTTATGGTGCCG ACGGAAATTTTAGCGGAGCAGCATGCCCAGTCATTGCAAACATTATTCGCGCCGACCGATGTTACCGTGGCGTTGTTGAC AAGCTCTGTGAAAGGAAAAAGAAGAAAGGAGATTTTAGAGCAGCTTGCTTGTGGAACGATTGATATTGTTGTTGGAACGC ACGCGCTTATTCAGGAAGAAGTCAATTTCCAAAAGCTTGGCTTAGTCATTACAGACGAACAACATCGCTTTGGGGTGGAA CAGCGCCGGATTTTGCGCGAAAAAGGGCAAGCGCCTGACGTGCTGATGATGACGGCGACGCCGATTCCGAGAACGCTTGC GATTACTGCGTTTGGCGAAATGGACGTATCGGTGATTGATGAAATGCCGGCTGGAAGAAAAAAAGTGCAGACGTATTGGG TAAAGCATCATATGTTTGAACGCGTCCTTGACTTTATGGAAAAAGAAATTCAAAAAGGGCGGCAAGCATATGTCATATGT CCGCTTATTGAGGAATCAGAAAAATTGGATGTGCAAAATGCGATTGATGTCCACAGCATGTTGACACATTATTATAGAGG AAAATATAACATCGGGCTGATGCACGGGCGCCTTTCTTCAGAGGAAAAAGAAGAAGTGATGAAAGCGTTCAGCGAAAACC GTATCCAAGTATTAGTTTCGACAACAGTTGTCGAAGTCGGCGTCAATGTGCCAAACGCTACAGTTATGGTGATTTATGAT GCGGAGCGGTTTGGGCTGGCGCAGCTGCATCAATTGCGCGGGCGGGTCGGCCGCGGCGATGAACAGTCGTACTGTATTTT AATCGCCGATCCAAAATCAGAAACAGGAAAAGAGCGCATGCGCATTATGACGGAAACAACGGACGGATTCGTACTTTCCG AAAAAGATTTGCAATTGCGCGGCCCGGGCGATTTTTTTGGCACAAAGCAAAGCGGCATGCCGGAATTTAAATTTGGAGAC GTCGTACATGATTATCGCATTTTGGAAGTAGCGCGCAACGATGCAGCGAAGCTGGTCCAGTCTGCCGCTTTTTGGCGCGA TGAGCCGTATCAATGGCTGCGCCTTTATTTGCATGAGTCCGGTGTGCTAGACGGAGAGAAATTAGATTGA Protein sequence : MAFQLIAVNRELQQPVTAIKGIGEETSEALREMGITTIEELLMHVPYRYEDYEVKDLAEVKHDEKVTVEGKVYSEPSLTY YAKKKSRLAFRLLVGRYLITVVCFNRPYLKQKLSINDTVTVSGKWDRHRQTITANELKMGALPQKRELEPVYSVRGSVTV KGMRRFIQLALTQYGEAIIDPLPLSMRQTYRLISKQEAIRAIHFPRSHEELKQARRRLVYEEFLLFQLKIHALRKVQREH SQGIAHSFSPEKLHDFIDRLPFPLTKAQQRVVREILTDMQSPYRMNRLLQGDVGSGKTVVAAIVLYAAVLSGYQGALMVP TEILAEQHAQSLQTLFAPTDVTVALLTSSVKGKRRKEILEQLACGTIDIVVGTHALIQEEVNFQKLGLVITDEQHRFGVE QRRILREKGQAPDVLMMTATPIPRTLAITAFGEMDVSVIDEMPAGRKKVQTYWVKHHMFERVLDFMEKEIQKGRQAYVIC PLIEESEKLDVQNAIDVHSMLTHYYRGKYNIGLMHGRLSSEEKEEVMKAFSENRIQVLVSTTVVEVGVNVPNATVMVIYD AERFGLAQLHQLRGRVGRGDEQSYCILIADPKSETGKERMRIMTETTDGFVLSEKDLQLRGPGDFFGTKQSGMPEFKFGD VVHDYRILEVARNDAAKLVQSAAFWRDEPYQWLRLYLHESGVLDGEKLD |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| recG | CAJ77039.1 | ATP-dependent DNA helicase | Not tested | AbaR1 | Protein | 2e-89 | 45 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Geoth_2736 | YP_004588705.1 | ATP-dependent DNA helicase RecG | BAC0356 | Protein | 2e-90 | 41 |
