Gene Information

Name : Geoth_0258 (Geoth_0258)
Accession : YP_004586388.1
Strain : Geobacillus thermoglucosidasius C56-YS93
Genome accession: NC_015660
Putative virulence/resistance : Resistance
Product : polyamine-transporting ATPase
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1116
EC number : 3.6.3.31
Position : 265698 - 266477 bp
Length : 780 bp
Strand : -
Note : PFAM: ABC transporter-like; KEGG: gmc:GY4MC1_0244 ABC transporter related protein; SMART: ATPase, AAA+ type, core

DNA sequence :
ATGCCCGAAACAAGCGGTGTAGAGCTAAGTATTCATCAATTGGAGAAATCGTTTGGCCATTTACACGTTTTACGCAAGAT
TGATTTGCAAATAGCCTCGGGGGAATTTGTGGCGATTGTCGGGAAAAGCGGTTGTGGAAAAAGCACATTACTTAGGCTCA
TTGCCGGGCTGGAAAAAGCAACTTCTGGAGAAATCAGGCAAAATGGAAAAACAATTAAGGAGTTAAATCCTCAAGCACGA
ATCATGTTCCAGGAAGCGCGTTTACTGCCTTGGAGATCGGTTCTTGAAAATGTCGGAGTTGGGCTTCGTCTCCAAAAAGA
TTGGAAGCAACGAGCCATTTGGGCATTGAAACAAGTCGGTCTAGAAGAACGGGCGCACGACTGGCCTTCCGTTTTATCAG
GGGGGCAAAAGCAACGAGTTTCGCTGGCAAGAGCGCTGGCCGCTCAACCGCAATTATTATTGCTGGATGAACCGTTAGGA
GCTTTGGATGCTTTAACTCGCATGGAAATGCAGGCACTGATTGAGGAGATTTGGCAGCAGCAAAAATTCACGGCATTATT
GGTTACCCATGATGTCAATGAAGCGATTACTTTAGCCGATCGTGTTGTTTTAATCGAAAAAGGAACGATAAAAATGGATT
TGCCAATTCCTCTCCCGAGACCCCGGAACCGCTCTGACTCCGCTTTTATCGAATTAGAAGAAAACGTTTTGGCACATGTA
TTGGAAAAAACATCATTGAAAAAGGAAACAGAGAATCTTAAAAGCGCCGCGAATGAATAG

Protein sequence :
MPETSGVELSIHQLEKSFGHLHVLRKIDLQIASGEFVAIVGKSGCGKSTLLRLIAGLEKATSGEIRQNGKTIKELNPQAR
IMFQEARLLPWRSVLENVGVGLRLQKDWKQRAIWALKQVGLEERAHDWPSVLSGGQKQRVSLARALAAQPQLLLLDEPLG
ALDALTRMEMQALIEEIWQQQKFTALLVTHDVNEAITLADRVVLIEKGTIKMDLPIPLPRPRNRSDSAFIELEENVLAHV
LEKTSLKKETENLKSAANE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed ABA47263.1 ABC transporter Not tested S-PAI Protein 7e-37 48
opuBA YP_005124363.1 choline transport system ATP-binding protein Not tested Not named Protein 1e-13 42
opuBA NP_938494.1 choline transport system ATP-binding protein Not tested Not named Protein 1e-13 42
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-15 41
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 1e-15 41
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-15 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Geoth_0258 YP_004586388.1 polyamine-transporting ATPase NC_012469.1.7686878. Protein 8e-17 41