Gene Information

Name : Geoth_2567 (Geoth_2567)
Accession : YP_004588539.1
Strain : Geobacillus thermoglucosidasius C56-YS93
Genome accession: NC_015660
Putative virulence/resistance : Unknown
Product : transketolase
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG0021
EC number : 2.2.1.1
Position : 2494916 - 2496922 bp
Length : 2007 bp
Strand : -
Note : TIGRFAM: Transketolase, bacterial-like; KEGG: gmc:GY4MC1_2523 transketolase; PFAM: Transketolase, N-terminal; Transketolase-like, pyrimidine-binding domain; Transketolase, C-terminal

DNA sequence :
ATGGCGCATACAATCGAGGAATTAGCGATTACAACGATTCGGACATTGTCGATTGATGCCATCGAAAAAGCAAAGTCCGG
TCATCCAGGAATGCCGATGGGAGCAGCACCGATGGCATATACACTTTGGACGAAATTTATGAATCACAATCCAAGCAATC
CGAAATGGTTTAACCGCGACAGATTCGTGTTATCCGCAGGGCATGGATCGATGCTGTTATACAGCCTGCTTCATTTAAGC
GGTTACGATGTTTCCATGGAAGATATTAAACAATTCCGTCAATGGGGCAGCAAAACGCCGGGGCATCCGGAGTATGGCCA
TACACCGGGGGTAGAAGCAACGACTGGTCCGCTCGGCCAAGGGATTGCGATGGCCGTTGGTATGGCAATGGCAGAGCGCC
ATTTAGCAGCTACATATAACCGGGAAAATTTTGAAATTATAAACCACTACACATATGCGATTTGCGGCGATGGCGATTTA
ATGGAAGGAGTTGCTGCCGAAGCTGCATCGCTGGCCGGGCATTTAAAACTTGGCCGCCTGATCGTTCTTTATGACTCGAA
CGATATTTCGCTTGATGGCGAATTACATCTTTCCTTCTCGGAAAGCGTTGAGCAACGCTTTAAAGCATATGGCTGGCAAT
ATTTGCGCGTCGAAGACGGGAATAATATTGAGGAAATTGCCAAAGCACTTGAGGAAGCAAAAGCGGACGAAACCCGCCCG
ACGCTGATTGAAGTGAAAACGACCATTGGCTACGGTTCCCCGAATAAAGCCGGAACGTCTAACGTACACGGCGCTCCGCT
TGGGGCGGAAGAGTTGAAACTTACGAAAGAAGCGTATAAATGGACGTTTGAAGAAGATTTTTACGTTCCGCAAGAAGTAT
ATGATCATTTCCGCCAAGTAGTAAAAGAAGCGGGAGAGAAAAAAGAAGCGGAATGGAATGAACTATTTGCCCAGTACGAA
AAAGCGTATCCGGATTTGGCGAAACAATTGAGATTGGCAATGAACGGAGAACTTCCAGAAGGATGGGAAAAAGCGCTTCC
GGTATATGAAGAAGGAAAAAGCCTGGCGACGCGCGCATCTTCTGGAGAGGTGTTAAACGCGATTGCGAAAACCGTTCCGC
AGCTGATTGGCGGTTCGGCTGACCTTGCAAGTTCCAATAAAACATTAATCAAAGGAGCCGGAAACTTTTTGCCAGAAAGC
TATGAAGGGCGCAACATTTGGTTTGGCGTACGTGAATTCGCGATGGGCGCAGCGCTGAACGGAATGGCGCTGCATGGAGG
CTTAAAAGTATTTGGCGGTACGTTCTTTGTGTTCTCCGATTATTTGCGTCCTGCCATTCGCCTCGCTGCGTTAATGGGCT
TGCCAGTGACGTACGTTCTTACACATGACAGCATCGCTGTTGGCGAAGACGGCCCGACGCATGAGCCAGTCGAGCAATTG
CCGTCGTTGCGCGCGATGCCGAATTTGTCGGTCATTCGCCCGGCTGATGCGAATGAAACCGCGGCGGCATGGCGTTTAGC
CGTAGAATCGACCGATCAGCCGACCGCGTTAGTATTGACGCGGCAAAATATCCCGACATTGCCGAATACGGCAGAACGGG
CATACGAAGGTGTGAAAAAGGGGGCTTACGTCTTATCTGAGGCGAAAAACGGCAATCCAGAAGCATTATTGCTTGCCTCC
GGTTCTGAGGTAAGCCTTGCGGTGAAAGCGCAACAAGCGTTAGCGGAAGAAGGCATTCACGTTTCCGTCATCAGCATGCC
GTCATGGGACCGTTTTGAAAAACAAGACGATGAGTATAAGCAGCAAGTGCTTCCAAGCACTGTGAAAAAGCGTTTGGCGA
TTGAAATGGCAGCTTCGCTCGGCTGGGAGCGTTATGTCGGCGATGAGGGCGACATTTTGGCAATCGATCGTTTCGGCGCT
TCTGCACCAGGAGAAAAAATTATGGAAGAGTACGGCTTTACTGTCGAAAATGTAGTCAAAAGAGTGAAAGCATTGCTGAA
AAAATAA

Protein sequence :
MAHTIEELAITTIRTLSIDAIEKAKSGHPGMPMGAAPMAYTLWTKFMNHNPSNPKWFNRDRFVLSAGHGSMLLYSLLHLS
GYDVSMEDIKQFRQWGSKTPGHPEYGHTPGVEATTGPLGQGIAMAVGMAMAERHLAATYNRENFEIINHYTYAICGDGDL
MEGVAAEAASLAGHLKLGRLIVLYDSNDISLDGELHLSFSESVEQRFKAYGWQYLRVEDGNNIEEIAKALEEAKADETRP
TLIEVKTTIGYGSPNKAGTSNVHGAPLGAEELKLTKEAYKWTFEEDFYVPQEVYDHFRQVVKEAGEKKEAEWNELFAQYE
KAYPDLAKQLRLAMNGELPEGWEKALPVYEEGKSLATRASSGEVLNAIAKTVPQLIGGSADLASSNKTLIKGAGNFLPES
YEGRNIWFGVREFAMGAALNGMALHGGLKVFGGTFFVFSDYLRPAIRLAALMGLPVTYVLTHDSIAVGEDGPTHEPVEQL
PSLRAMPNLSVIRPADANETAAAWRLAVESTDQPTALVLTRQNIPTLPNTAERAYEGVKKGAYVLSEAKNGNPEALLLAS
GSEVSLAVKAQQALAEEGIHVSVISMPSWDRFEKQDDEYKQQVLPSTVKKRLAIEMAASLGWERYVGDEGDILAIDRFGA
SAPGEKIMEEYGFTVENVVKRVKALLKK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tktA AAO17218.1 TktA Not tested tcd island Protein 8e-156 53
APECO1_2641 YP_859417.1 transketolase Not tested Not named Protein 2e-153 50