|
Name : Geoth_2305 (Geoth_2305) Accession : YP_004588312.1 Strain : Geobacillus thermoglucosidasius C56-YS93 Genome accession: NC_015660 Putative virulence/resistance : Virulence Product : urease subunit alpha Function : - COG functional category : E : Amino acid transport and metabolism COG ID : COG0804 EC number : 3.5.1.5 Position : 2229831 - 2231543 bp Length : 1713 bp Strand : - Note : PFAM: Amidohydrolase 1; Urease alpha-subunit, N-terminal; TIGRFAM: Urease, alpha subunit; HAMAP: Urease subunit alpha; KEGG: gmc:GY4MC1_2219 urease, alpha subunit DNA sequence : ATGAGTTTTTCCATGTCACGAAAACAATATGCGGACATGTTTGGACCGACAACAGGAGATTGTGTTCGTTTAGCGGATAC CGATTTATGGATTGAGATGGAACAGGACTTTACCGTCTATGGCGATGAAGTAAAATTTGGCGGCGGAAAAGTCATTCGTG ATGGAATGGGGCAACACCCGCTTGCCACGCGTGCGGAATCGGTGGATTTAGTGCTGACGAACGCGATGATTGTCGACTAT ACCGGAATTTATAAAGCCGATATCGGGATTAAAGACGGGAAAATTGCCGCCATTGGGAAAGCGGGCAATCCGTTGTTAAT GGACGGAGTCAATATCATCATCGGAGCGGCGACAGAAGTGATTGCGGCGGAGGGGAAAATTGTTACCGCAGGAGGAATTG ACGCCCATATTCACTTTATTTGTCCGCAACAAATCGAAACGGCTTTGTCATCGGGGATTACGACGATGATCGGCGGGGGA ACCGGGCCGGCGACGGGAACCAATGCGACGACATGCACCCCTGGGGAATGGAACATCTATCGCATGTTGGAAGCGGCCGA AGCGTTTCCGATGAATCTTGGATTTTTAGGGAAAGGCAACGCATCGGCGAAAGAGCCGTTAGCGGAGCAAATTCGCGCAG GAGCCATTGGCTTAAAGCTTCATGAAGATTGGGGGACAACAGCGGCAGCCATTGATGCCAGTTTGCAGGTTGCGGACGAA TATGATGTGCAAGTGGCGATTCATACCGATACGCTGAATGAAGGGGGATTTGTCGAAGATACATTACGGGCGATTAACGG GCGCGTCATTCACACCTATCATACGGAAGGAGCGGGCGGAGGACATGCGCCAGATATTATGAAAGTAGCGAGTTTTCCAA ATATATTGCCTTCTTCTACCAATCCAACGCGGCCTTATACAAAAAATACGTTAGCGGAGCATTTAGACATGTTGATGGTT TGCCATCATTTAGACCCGTCTGTTCCGGAAGATATTGCCTTTGCCGACTCGCGCATTCGCAAAGAAACGATTGCGGCGGA AGATATTCTCCATGATTTCGGTGCTTTTAGCATGATCAGTTCTGATTCGCAAGCAATGGGGCGTGTCGGGGAAGTAATTT TGCGCACATGGCAAACAGCGGATAAGATGAAAAAGCAATTTGGGAAATTGCCAGAAGACAAAGGAAGAAAAGGAGATAAT TTTCGCGTAAAGCGTTATATTGCCAAATATACGATAAATCCGGCGCTTACCCACGGGATTGCGAAGCATGTCGGATCGGT TGAAGTGGGGAAATTGGCCGATTTAGTCGTTTGGCATCCTGCGTTTTTCGGCGTTAAACCAGAACTTGTGCTGAAAGGGG GAATGATTGCCTATAGCGTCATGGGAGATCCCAATGCCAGCATTCCGACTCCGCAGCCAGCCATGTATCGGCCGATGTTT GCAAGCTATGGAAAGGCTTTATATAACACTTCGATTACATTTGTATCAAAAGCAGCTTTTGAGCGCGGAATCCCGCAGAA ATTGAAGTTGCAAAAAATCATTCAACCAGTAGAGCACATTCGCCGTTTGTCGAAAAAGGATATGGTGTTCAACAATGCAA TGCCAAAGATTGATGTCGATCCGCAAACGTATGAAGTAAAAGTGGACGGAACCATTATTACGTGTGAACCAGCCGAAGTA ATCCCGATGGCGCAACGATATTTTTTATTTTGA Protein sequence : MSFSMSRKQYADMFGPTTGDCVRLADTDLWIEMEQDFTVYGDEVKFGGGKVIRDGMGQHPLATRAESVDLVLTNAMIVDY TGIYKADIGIKDGKIAAIGKAGNPLLMDGVNIIIGAATEVIAAEGKIVTAGGIDAHIHFICPQQIETALSSGITTMIGGG TGPATGTNATTCTPGEWNIYRMLEAAEAFPMNLGFLGKGNASAKEPLAEQIRAGAIGLKLHEDWGTTAAAIDASLQVADE YDVQVAIHTDTLNEGGFVEDTLRAINGRVIHTYHTEGAGGGHAPDIMKVASFPNILPSSTNPTRPYTKNTLAEHLDMLMV CHHLDPSVPEDIAFADSRIRKETIAAEDILHDFGAFSMISSDSQAMGRVGEVILRTWQTADKMKKQFGKLPEDKGRKGDN FRVKRYIAKYTINPALTHGIAKHVGSVEVGKLADLVVWHPAFFGVKPELVLKGGMIAYSVMGDPNASIPTPQPAMYRPMF ASYGKALYNTSITFVSKAAFERGIPQKLKLQKIIQPVEHIRRLSKKDMVFNNAMPKIDVDPQTYEVKVDGTIITCEPAEV IPMAQRYFLF |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| ureC | NP_286680.1 | urease subunit alpha | Virulence | TAI | Protein | 3e-168 | 68 |
| ureC | NP_287088.1 | urease subunit alpha | Not tested | TAI | Protein | 3e-168 | 68 |
| ureC | YP_005684266.1 | Urease alpha subunit | Not tested | PiCp 7 | Protein | 6e-164 | 65 |
| ureC | YP_005682174.1 | Urease alpha subunit | Not tested | PiCp 7 | Protein | 1e-165 | 65 |
| ureC | YP_003784325.1 | urease subunit alpha | Not tested | PiCp 7 | Protein | 1e-165 | 65 |
| ureC | YP_005686358.1 | Urease alpha subunit | Not tested | PiCp 7 | Protein | 1e-165 | 65 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Geoth_2305 | YP_004588312.1 | urease subunit alpha | VFG0270 | Protein | 1e-160 | 67 |
