Gene Information

Name : Geoth_2240 (Geoth_2240)
Accession : YP_004588254.1
Strain : Geobacillus thermoglucosidasius C56-YS93
Genome accession: NC_015660
Putative virulence/resistance : Unknown
Product : integrase catalytic subunit
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG2801
EC number : -
Position : 2157441 - 2158322 bp
Length : 882 bp
Strand : -
Note : PFAM: Integrase, catalytic core; KEGG: bwe:BcerKBAB4_1194 integrase catalytic region

DNA sequence :
ATGGAATCAGTACCAACTCACAAGAAGTTCGCGATCATTCAAGAAATGGTCGGGCGTTATGGTTCGATTCAACTATTATG
TGAGATAGCAGGCGTATCTCGAAGTGGATATTACAAGTGGGTAAAACGACAGGAACGCCCTTCTCAGAAGCAATTAGAAG
ACGAGCAGCTAAAGGAAAAAATCAAAGAGTGCCATGAAGAAGGGAAAGGAATCTATGGGTATCGGAGAGTCAAAGTCTGG
CTGAAACGGAAACACAAACTGGATATCAACCATAAACGAGTACAAAGGCTGATGAGGGAGATGGGAATCCGGGCGGTGAT
TCAGAAGAAACGGCCTTATTACGGAAAGAAAGAGCCTTATGTGATTTCGGACAATCATCTAAACCGAGATTTCCCCGCGC
CAAAGCCAAACGAGAAGTGGGTTACAGATATTACCTATTTAATATTTAATGGGCAAAAGCTCTATTTGTCCGCCATTAAA
GACCTATACAATAATGAAATCGTGGCCTACCATATCAGCCAAAGAAATGATATCAAACTGGGGCTCGACACGCTAAAAAA
GGCCATAAAAAAACGGAATGTAAATGGACTCCTCCTCCATAGTGATCAGGGGTTCCAGTATACATCCCGTCCATACAACA
ACCTACTAAAAAGATACAATATAAAGGCCAGTATGTCCAGAAAAGGAAACTGCTTGGACAATGCCTGCATGGAAGACTTC
TTTAGCCATTTCAAGGCAGAGTGTTTTCATCTGTACTCATTCCGCACGGCCGAAGAAGTGAAGGATGCCGTACACAAATA
TATTCGTTTTTATAACCATCAACGTTTCCAAAAGAAATTAAATAACCTGAGTCCTTATGAATATAGGACTCAGGCTGATT
AA

Protein sequence :
MESVPTHKKFAIIQEMVGRYGSIQLLCEIAGVSRSGYYKWVKRQERPSQKQLEDEQLKEKIKECHEEGKGIYGYRRVKVW
LKRKHKLDINHKRVQRLMREMGIRAVIQKKRPYYGKKEPYVISDNHLNRDFPAPKPNEKWVTDITYLIFNGQKLYLSAIK
DLYNNEIVAYHISQRNDIKLGLDTLKKAIKKRNVNGLLLHSDQGFQYTSRPYNNLLKRYNIKASMSRKGNCLDNACMEDF
FSHFKAECFHLYSFRTAEEVKDAVHKYIRFYNHQRFQKKLNNLSPYEYRTQAD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
APECO1_1088 YP_853108.1 transposase subunit Not tested PAI IV APEC-O1 Protein 8e-47 46
EFAU085_00737 YP_008394261.1 ISEnfa3, transposase Not tested Not named Protein 9e-45 45
SEQ_1760 YP_002746996.1 transposase Not tested ¥ÕSeq3 Protein 1e-35 42
SEQ_0791 YP_002746129.1 transposase Not tested ¥ÕSeq2 Protein 1e-35 42