Gene Information

Name : Geoth_1969 (Geoth_1969)
Accession : YP_004588005.1
Strain : Geobacillus thermoglucosidasius C56-YS93
Genome accession: NC_015660
Putative virulence/resistance : Resistance
Product : protein tyrosine phosphatase
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0394
EC number : 3.1.3.48
Position : 1882126 - 1882548 bp
Length : 423 bp
Strand : +
Note : SMART: Protein-tyrosine phosphatase, low molecular weight; TIGRFAM: Arsenate reductase StaphA (thioredoxin); KEGG: gmc:GY4MC1_1900 arsenate reductase (thioredoxin); PFAM: Protein-tyrosine phosphatase, low molecular weight

DNA sequence : 
ATGAAAAACAAAAAGATCATTTACTTCTTATGCACAGGTAACTCTTGCCGCAGCCAAATGGCAGAAGGATGGGCAAAAAA
ATATCTTGGCGACGAGTGGGAAGTGTACAGCGCCGGTATTGAAGCGCATGGACTAAATCCAAACGCGGTAAAAGTCATGA
AAGAAGCAGGGGTTGACATTTCCAACCAGACATCGGATGTCATTGATCCGGAAATTTTAAATAAAGCAGATTTGGTTGTA
ACATTATGTGGTCATGCAGCAGACCATTGCCCGGTAACCCCGCCAAATGTGAAACGCGTACACTGGGGATTTGATGATCC
GGCAAAGGCGGAAGGAACGGAAGAGGAAAAATTAGCTGTATTCCGTCGCATCCGCGATGAAATCGGCGCGCGCATCAAAA
AATTTGCTGAAACAGGCGAATAA

Protein sequence : 
MKNKKIIYFLCTGNSCRSQMAEGWAKKYLGDEWEVYSAGIEAHGLNPNAVKVMKEAGVDISNQTSDVIDPEILNKADLVV
TLCGHAADHCPVTPPNVKRVHWGFDDPAKAEGTEEEKLAVFRRIRDEIGARIKKFAETGE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
arsC YP_005754064.1 arsenate reductase Not tested Type-XI SCCmec Protein 3e-38 63
arsC YP_252016.1 arsenate reductase Not tested SCCmec Protein 3e-40 63
arsC YP_252023.1 arsenate reductase Not tested SCCmec Protein 7e-39 63

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Geoth_1969 YP_004588005.1 protein tyrosine phosphatase BAC0581 Protein 4e-52 82
Geoth_1969 YP_004588005.1 protein tyrosine phosphatase BAC0032 Protein 2e-38 62
Geoth_1969 YP_004588005.1 protein tyrosine phosphatase BAC0580 Protein 1e-37 60