Gene Information

Name : Geoth_1905 (Geoth_1905)
Accession : YP_004587948.1
Strain : Geobacillus thermoglucosidasius C56-YS93
Genome accession: NC_015660
Putative virulence/resistance : Resistance
Product : ArsR family transcriptional regulator
Function : -
COG functional category : K : Transcription
COG ID : COG0640
EC number : -
Position : 1817355 - 1817663 bp
Length : 309 bp
Strand : +
Note : KEGG: gmc:GY4MC1_1836 transcriptional regulator, ArsR family; PFAM: HTH transcriptional regulator, ArsR; SMART: HTH transcriptional regulator, ArsR

DNA sequence : 
ATGAAGAGGGAAGACCATTCGTTCTTAACATCTGAAACGATTGAAAATGTTTCACAAATCTTTAAGGTGTTATCCGATCC
AACACGAATCAAAATTCTTTACTTGCTGTCGCAAGAAGAGTGCAATGTCAATCATATAGCAGAAATATTGGGAATGTCGC
AATCAGCCGTTTCCCATCAACTAAGTATGTTGCGAAATCTGAGACTGGTTAAGTACCGGCGCGAAGGAAAAACATTGTTT
TACTCCTGCGATGATGAACACGTTATTTCATTATTAAAGCAAGCTATTGACCATGCTGAACATCATTAA

Protein sequence : 
MKREDHSFLTSETIENVSQIFKVLSDPTRIKILYLLSQEECNVNHIAEILGMSQSAVSHQLSMLRNLRLVKYRREGKTLF
YSCDDEHVISLLKQAIDHAEHH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed BAB47608.1 cadmium resistance protein C Not tested Type-III SCCmec Protein 2e-13 47
cadC BAC57488.1 Cadmium efflux system accessory protein homolog, cadmium resistance protein C Not tested Type-IIIinv SCCmec Protein 2e-13 47

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Geoth_1905 YP_004587948.1 ArsR family transcriptional regulator BAC0281 Protein 1e-12 46
Geoth_1905 YP_004587948.1 ArsR family transcriptional regulator BAC0366 Protein 1e-12 44
Geoth_1905 YP_004587948.1 ArsR family transcriptional regulator BAC0056 Protein 5e-10 42