|
Name : Geoth_0034 (Geoth_0034) Accession : YP_004586175.1 Strain : Geobacillus thermoglucosidasius C56-YS93 Genome accession: NC_015660 Putative virulence/resistance : Unknown Product : seryl-tRNA synthetase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG0172 EC number : 6.1.1.11 Position : 22121 - 23395 bp Length : 1275 bp Strand : + Note : TIGRFAM: Seryl-tRNA synthetase, class IIa; KEGG: gmc:GY4MC1_0013 seryl-tRNA synthetase; PFAM: Aminoacyl-tRNA synthetase, class II (G/ H/ P/ S), conserved region; Seryl-tRNA synthetase, class IIa, N-terminal DNA sequence : ATGCTCGATGTGAAGTATTTGCGCAATCATTTTCAAGAAGTGAAAGAAAGAATTCAAAAGCGCGGCGGAGATTTAGCGAA TATGGACCGTTTTGCAGAGCTCGACAAAAAGCGCCGCGAATTAATCGCAAAAGCAGAAGAACTAAAAAATAAAAGAAATG AAGTATCCCAACAAATCGCTGTGTTAAAGCGGGAGAAAAAAGATGCCAATCATCTTATTGCCGAGATGCGGGAAGTAGGG GATCGCATTAAAGCAATGGATGATGAAATCCGGCAAGTGGAAGAAGAATTAAATGCGCTGTTATTGTCCATTCCAAACAT CCCGCATGAATCGGTACCTGTCGGTAAGTCGGAAGAAGATAATGTCGAAGTCCGCAAATGGGGAGAGCCGCGTTCATTTT CGTTTGAGCCGAAACCGCACTGGGATATCGCCGATCAGCTCGGTATTCTTGATTTTGAACGGGCTGCGAAAGTGACGGGA AGCCGCTTTGTCTTTTATAAAGGACTTGGTGCCCGCCTAGAGCGCGCGTTAATTAACTTTATGCTTGATGTTCATATCGA AGAGTTTGGCTATCAAGAAATATTGCCTCCATATCTTGTTAATCGGGCGAGCATGACAGGGACAGGACAACTGCCAAAGT TTGAAGAAGACGCATTTCGCATTGAAACAGAGGATTACTTTTTAATTCCGACGGCAGAAGTGCCTGTGACCAATTTGCAT CGCGATGAAATTTTATCGGCGGAAGATTTGCCGATTTACTATGCTGCTTACAGCGCGTGTTTCCGCGCCGAAGCCGGCGC TGCTGGACGTGATACAAGAGGGCTTATTCGCCAGCATCAATTTAATAAAGTAGAACTTGTGAAATTTGTAAAACCGGAAG ATTCGTATGATGAATTAGAAAAATTGACCAATCAAGCGGAGAGAATTTTGCAGCTTCTTGGGCTTCCTTATCGGGTTGTA TGTTTATGTACCGGTGATTTAGGATTTGCGGCGGCGAAAACGTATGATATTGAAGTATGGCTGCCAAGTTATGGAACGTA TCGTGAGATTTCTTCTTGCAGCAATTTTGAAGCGTTCCAAGCACGGCGTGCTAATATTCGTTTCCGCCGTGAACCAAAAT CAAAGCCGGAATATGTCCATACACTCAACGGATCAGGATTGGCCATTGGCCGCACAGTAGCTGCCATTTTAGAAAATTAC CAGCAAGAGGATGGCACCGTTGTCATTCCGGAAGTATTGCGCCCGTACATGGGAAATCGAGAAGTTATTCGATAA Protein sequence : MLDVKYLRNHFQEVKERIQKRGGDLANMDRFAELDKKRRELIAKAEELKNKRNEVSQQIAVLKREKKDANHLIAEMREVG DRIKAMDDEIRQVEEELNALLLSIPNIPHESVPVGKSEEDNVEVRKWGEPRSFSFEPKPHWDIADQLGILDFERAAKVTG SRFVFYKGLGARLERALINFMLDVHIEEFGYQEILPPYLVNRASMTGTGQLPKFEEDAFRIETEDYFLIPTAEVPVTNLH RDEILSAEDLPIYYAAYSACFRAEAGAAGRDTRGLIRQHQFNKVELVKFVKPEDSYDELEKLTNQAERILQLLGLPYRVV CLCTGDLGFAAAKTYDIEVWLPSYGTYREISSCSNFEAFQARRANIRFRREPKSKPEYVHTLNGSGLAIGRTVAAILENY QQEDGTVVIPEVLRPYMGNREVIR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| serS | YP_003446791.1 | seryl-tRNA synthetase | Not tested | The aminoglycoside resistance gene cluster | Protein | 1e-132 | 62 |
