Gene Information

Name : Geoth_1622 (Geoth_1622)
Accession : YP_004587678.1
Strain : Geobacillus thermoglucosidasius C56-YS93
Genome accession: NC_015660
Putative virulence/resistance : Virulence
Product : iron-chelate-transporting ATPase
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1120
EC number : 3.6.3.34
Position : 1546849 - 1547664 bp
Length : 816 bp
Strand : +
Note : PFAM: ABC transporter-like; KEGG: gmc:GY4MC1_1541 ABC transporter related protein; SMART: ATPase, AAA+ type, core

DNA sequence : 
ATGAACGCCTTACAAGCAAAAGGGTTAACATTATCATATGGAAACACGATCATTATCGATGAGCTGGATTTAATGATTCC
AAAAGGAGAAATTACCGTATTTATCGGGGGAAACGGCTGCGGCAAATCGACGCTGCTTCGCGCTTTGGCACGGCTTTTGA
AGCCGGCAGGCGGTTCCGTTTTACTAGAAGGAAAAGAAATCGCGACATTGCCGACAAAAGAAGTGGCGAAAAAACTGGCG
ATTTTGCCGCAATCACCGACAGCTCCGGAAGGATTGACGGTACTGCAGCTTGTTAAACAGGGGCGGTATCCGTATCAGAC
GTGGTTAAAACAATGGAGTGAAGAAGACGAACAAGCGGTGCGGCGCGCGCTCGAAGCGACGAGAATGACAGAATTAGCGG
AACGCCCGGTCGATTCGCTTTCGGGGGGGCAGCGGCAGCGCGCTTGGATCGCGATGACATTAGCGCAAGATACGGACATT
ATCTTATTGGACGAACCAACCACCTATTTGGATATGACGCACCAGATTGAAATTCTTGATTTATTGTTTGAGCTAAACGA
GAAAGAAAAACGCACGATTGTCATGGTGCTCCATGATCTTAACTTGGCGTGCCGCTATGCCCATCATATCGTTGCAATTC
GCGATAAAAAAATATATGCGCAAGGAAAGCCGGAAGAAATCATTTCCTGTCAACTTGTGAAAGACGTATTTCAAATGGAC
TGTCAAGTGACATATGATCCATTATTTGGAACTCCGCTCTGTATTCCGTACGGAAAAGGAAGATGTCTTTTGCAGAAAGA
AGGAGTCCCGTCATGA

Protein sequence : 
MNALQAKGLTLSYGNTIIIDELDLMIPKGEITVFIGGNGCGKSTLLRALARLLKPAGGSVLLEGKEIATLPTKEVAKKLA
ILPQSPTAPEGLTVLQLVKQGRYPYQTWLKQWSEEDEQAVRRALEATRMTELAERPVDSLSGGQRQRAWIAMTLAQDTDI
ILLDEPTTYLDMTHQIEILDLLFELNEKEKRTIVMVLHDLNLACRYAHHIVAIRDKKIYAQGKPEEIISCQLVKDVFQMD
CQVTYDPLFGTPLCIPYGKGRCLLQKEGVPS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SPN23F_09560 YP_002510939.1 ferric siderophore ABC transporter ATP-binding protein Virulence PPI-1 Protein 6e-58 50
SP_1035 NP_345510.1 iron-compound ABC transporter ATP-binding protein Not tested PPI-1 Protein 6e-58 50
iusE YP_005143742.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 1e-57 50
fagC YP_005684488.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 4e-54 48
fagC YP_005680307.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 4e-54 48
fagC YP_003782430.1 ABC transporter ATP-binding protein Not tested PiCp 1 Protein 4e-54 48
fagC YP_005682397.1 ATP binding cytoplasmic membrane protein Virulence PiCp 1 Protein 4e-54 48
fecE AAL08451.1 ATP-binding protein FecE Virulence SRL Protein 2e-49 45
DIP0585 NP_938961.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 2e-47 44
ciuD YP_005681255.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 2e-47 44
ciuD YP_005683346.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 2e-47 44
ciuD YP_003783391.1 iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 2e-47 44
ciuD YP_005685432.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 2e-47 44

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Geoth_1622 YP_004587678.1 iron-chelate-transporting ATPase BAC0164 Protein 1e-49 45

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Geoth_1622 YP_004587678.1 iron-chelate-transporting ATPase VFG0925 Protein 5e-60 52
Geoth_1622 YP_004587678.1 iron-chelate-transporting ATPase VFG1042 Protein 1e-49 45