Gene Information

Name : Geoth_1621 (Geoth_1621)
Accession : YP_004587677.1
Strain : Geobacillus thermoglucosidasius C56-YS93
Genome accession: NC_015660
Putative virulence/resistance : Virulence
Product : ABC transporter
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG0609
EC number : -
Position : 1545778 - 1546833 bp
Length : 1056 bp
Strand : +
Note : PFAM: Bacterial transport system permease protein; KEGG: gmc:GY4MC1_1540 transport system permease protein

DNA sequence : 
ATGAAGAAGTATACATCGTTGCGAGTCGGGAAGTCGATCTCATTTTTAGTCGATAAAAAAGCGTTAACTGTTAGTTGGAT
ATTATTCACTGTTGGCGTCGTCGTGTTTCTTGTCAGCGCAGGAAGCGGCGAAATGTATATATCCCCTCTGGAAGTGGCGA
AAACGCTGGTTGGAAATGGTTCTGAGATGAATGAAGTCGTGATTTATACGTTCCGCTTGCCGCGCATTTTTGTCGCATTG
TTAGCGGGAATGTCGCTTGCCGCGGCAGGTGCGATTTTACAAGGGATGATCCGCAATCCGCTTGCCTCGCCAGATGTGCT
TGGCATAACGGGAGGGGCCGCGGCGGCGGTCGTCGCGTTTTTATCGTTCTTTAGCGACGATAAAAATAATTCCTTAACCA
TCAGCATCCATTGGCTTCCACTTGGCGCGTTTGCCGGCGCGACGGTGGCCGCTTTGCTCGTGTATATGCTGGCTTGGAAA
AACGGCATCGCGCCGCTGCGGCTCGTATTAATAGGGATTGCGATATCTGCGCTGATGCAGGCGCTAACGACATTATTAAT
GATTACCGGCCCGATTTACCGGGCGAGCCAGGCGAACGTCTGGATTACCGGAAGCGTCTACGGCGCTTCGTGGAAACATG
TTACACTGCTTGCGCCATGGGCTTTGGTTTTACTTGCGGCTAGCTGGCTATCGGCGCGGAAGATGAACATTCAAGAATTA
GGCGATGACTTGGCCATCGGTGCGGGGGTTTCCTTGCAAAAGCAACGTTTTTTCCTTCTTTTATTAAGCACTGCCTTAAC
CGGGGGAGCGGTCGCTTTTGCGGGAGGCATTGGCTTTGTCGGGTTGATGGCGCCGCATATGGCAAGAAGGCTTGTCGGTT
CTTCGTTTGGCGCACTCCTTCCTGCCTCCGCTTTATTAGGGGCCATTTTAGTCATGGCGGCTGACCTTGCCGGGCGCATG
CTGTTTGCCCCTATGGAAATTCCAGCCGGGGTGTTTACAGCGGCAATCGGGGCACCGTATTTTATTTACCTATTATATAA
AAGCCGGTATGCATAA

Protein sequence : 
MKKYTSLRVGKSISFLVDKKALTVSWILFTVGVVVFLVSAGSGEMYISPLEVAKTLVGNGSEMNEVVIYTFRLPRIFVAL
LAGMSLAAAGAILQGMIRNPLASPDVLGITGGAAAAVVAFLSFFSDDKNNSLTISIHWLPLGAFAGATVAALLVYMLAWK
NGIAPLRLVLIGIAISALMQALTTLLMITGPIYRASQANVWITGSVYGASWKHVTLLAPWALVLLAASWLSARKMNIQEL
GDDLAIGAGVSLQKQRFFLLLLSTALTGGAVAFAGGIGFVGLMAPHMARRLVGSSFGALLPASALLGAILVMAADLAGRM
LFAPMEIPAGVFTAAIGAPYFIYLLYKSRYA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
fecD AAL08452.1 FecD Virulence SRL Protein 6e-14 43

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Geoth_1621 YP_004587677.1 ABC transporter BAC0163 Protein 4e-14 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Geoth_1621 YP_004587677.1 ABC transporter VFG1043 Protein 3e-14 43