Gene Information

Name : Geoth_1583 (Geoth_1583)
Accession : YP_004587642.1
Strain : Geobacillus thermoglucosidasius C56-YS93
Genome accession: NC_015660
Putative virulence/resistance : Virulence
Product : betaine aldehyde dehydrogenase
Function : -
COG functional category : C : Energy production and conversion
COG ID : COG1012
EC number : 1.2.1.8
Position : 1511158 - 1512675 bp
Length : 1518 bp
Strand : +
Note : KEGG: gmc:GY4MC1_1491 aldehyde dehydrogenase; PFAM: Aldehyde dehydrogenase

DNA sequence :
ATGGCGACCGTGAAAGAACAAAAAATGGAGAAGCTTGAAACAAAACGTGAAATGTATCATCTGATTATTAACGGGGAACG
TGTCGAAAGCGCTTCCGGGGAAACGTTTACGACATACAACCCGGCAACAGGGGAGCCGGTTGCGAAAGTAGCGAAAGGAA
CGAAAGAAGATGCGGAGCGTGCTATTCAAGCGGCGCGTCAAGCTTTTGATCATGGCAAATGGCGCCATTTTCCTGTCAAC
AAACGGGCGCGTATTTTAAACAAAATTGCTTCTATTATGCGTTCCCGTTTTCATGAGTTAGTAGAATTAGAGATTTTAGA
TACAGGGAAAGCACTTTCCGCCGCACAAGGGCAAGTGATGCAGGCGATTGAAGATTTTGAATTTTACGCCAGTGCCATTA
TCAGCCATCGCGGCACGGTCAACAATATGCCAGGTGCGTTTCATAATTTTACCGAAAAAGAGCCTGTCGGGGTATGTGCG
CAAATTATCCCATGGAATTATCCATTGATGATGGCAGCGTGGAAAATTGCCCCAGCCATTGCAGCAGGGTGTTCCGTTGT
TGTCAAGCCGGCTTCATTAACACCGCTGACATGTATCGTACTTGCAGAAATTTGTCATGAAGCTGGCGTCCCGGAAGGTG
TCGTCAACGTAGTGACCGGGTCTGGCTCTGAAGTCGGGAATTATTTAGTTGAGCATCCGCTTGTTGATAAAGTTGCCTTT
ACTGGTTCGACTCCAGTTGGAAAAAATATTATGGAAAAAGCGTCGAAAACGTTAAAACGGGTAACATTAGAACTCGGCGG
CAAATCGCCGAACATCATCTTCGAGGATGCAGACATTGATGCCGCTGTTAACGGTTCATTATTCGGAATTTTCTATAATA
CCGGACAATCTTGTGAAGCGCGTTCCCGTTTATACGTACATGAAAGTATTTACGATCAATTCATCGAAAAATTTGTTGAA
AAAACGAAAAAATTGAAGCTTGGCAATCCGTTTGAGCAAGATACCCATGTTGGTGCCATCATTAGCCGCGAACAACTAGA
AGTTATTGACGGCTATGTGAAATCTGCCATCGAAGAGGGAGCTACGATTGTCACTGGCGGGAGAAAAGCGAAAGTGGAAG
GGTTTGAAAACGGTTTTTGGTACGAACCAACCATTATTACGGATGTCAATCATCAAATGAAAGTCGTTAAAGAAGAAATT
TTCGGCCCGGTCGTCGTTGTAATGAAATTTAATGATGAAAATGAGGTCATTAAATTGGCTAATGACAGTGAATATGGCTT
GGGATCGGCCATCTGGACAAAAGATCATGCACGTGCGATTCGTGTGGCGAAACAAATTCAAGCTGGTATTGTCATGGTTA
ATAGCCCGTTCTCCGCGTTCCCAGGAACGCCGTTTGGCGGATATAAACAGTCCGGATTCGGACGTGAGCTTTGCATCGAA
ACACTCGACTTATATACGGAAACGAAAAGCATCCTGTCTTATTATGGAAGCCGTCCGCTCAATCCTTTCGGCGTGTAA

Protein sequence :
MATVKEQKMEKLETKREMYHLIINGERVESASGETFTTYNPATGEPVAKVAKGTKEDAERAIQAARQAFDHGKWRHFPVN
KRARILNKIASIMRSRFHELVELEILDTGKALSAAQGQVMQAIEDFEFYASAIISHRGTVNNMPGAFHNFTEKEPVGVCA
QIIPWNYPLMMAAWKIAPAIAAGCSVVVKPASLTPLTCIVLAEICHEAGVPEGVVNVVTGSGSEVGNYLVEHPLVDKVAF
TGSTPVGKNIMEKASKTLKRVTLELGGKSPNIIFEDADIDAAVNGSLFGIFYNTGQSCEARSRLYVHESIYDQFIEKFVE
KTKKLKLGNPFEQDTHVGAIISREQLEVIDGYVKSAIEEGATIVTGGRKAKVEGFENGFWYEPTIITDVNHQMKVVKEEI
FGPVVVVMKFNDENEVIKLANDSEYGLGSAIWTKDHARAIRVAKQIQAGIVMVNSPFSAFPGTPFGGYKQSGFGRELCIE
TLDLYTETKSILSYYGSRPLNPFGV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
VC0819 NP_230467.2 aldehyde dehydrogenase Not tested VPI-1 Protein 2e-76 42
hpaE AAO17179.1 HpaE Not tested tcd island Protein 5e-82 42
aldA AAC12273.1 aldehyde dehydrogenase Virulence VPI Protein 4e-79 41
aldA AAK20747.1 aldehyde dehydrogenase Virulence VPI Protein 4e-79 41
aldA AAK20776.1 aldehyde dehydrogenase Virulence VPI Protein 4e-79 41
aldA-1 YP_001216300.1 aldehyde dehydrogenase Not tested VPI-1 Protein 1e-78 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Geoth_1583 YP_004587642.1 betaine aldehyde dehydrogenase VFG0082 Protein 8e-77 42