Gene Information

Name : Geoth_1370 (Geoth_1370)
Accession : YP_004587439.1
Strain : Geobacillus thermoglucosidasius C56-YS93
Genome accession: NC_015660
Putative virulence/resistance : Unknown
Product : riboflavin biosynthesis protein RibD
Function : -
COG functional category : H : Coenzyme transport and metabolism
COG ID : COG1985
EC number : 1.1.1.193
Position : 1308019 - 1309104 bp
Length : 1086 bp
Strand : +
Note : TIGRFAM: Riboflavin biosynthesis protein RibD; Riboflavin-specific deaminase, C-terminal; KEGG: gmc:GY4MC1_1260 riboflavin biosynthesis protein RibD; PFAM: Bacterial bifunctional deaminase-reductase, C-terminal; CMP/dCMP deaminase, zinc-binding

DNA sequence :
GTGCGAAACGATGAACAATATATGCGCCTGGCGATCGAAATGGCGAAAGCGGGGATCGGGCAGACGTCTCCTAATCCGAT
TGTTGGCGCTGTCGTTGTTAACAGTGGAGAAATTGTCGGATTTGGCGCGCATTTGAAAGCGGGGGAGCCGCATGCGGAAG
TGCATGCCATCCGGATGGCGGGAGAAAAAGCGAAAGGGGCGACCGTGTATGTGACGCTGGAGCCATGCAGCCATTATGGA
AAAACGCCCCCTTGCGCCGATTTATTAATTGATGCGGGCGTCCGGCGCGTTGTTATTGCGACGACAGACCCGAACCCGCT
CGTAGCGGGCAAAGGCATCGAAAAGCTAAGGAATGCGGGAATCGATGTAAAGCTTGGGGTGCTGAAAGAAGAAGCGGATG
AGTTAAATCGCGTGTTTTTCCATTACATTGCGACAAAAACGCCATTTGTGACGCTAAAATACGCGAGCAGCCTCGATGGA
AAAATCGCCACGGCAACAGGGGAAAGCAAATGGATCACATCGGAAGCGGCCAGGGAAGATGTGCATCGTTACCGGGCGGT
GCATGATGCAATTCTCGTCGGGGTGGACACCGTCATTGCCGATAACCCAAGCTTAACGGTAAGGCTTCCGGGCAGCGGAA
AGAATCCGATCCGCATCGTTTTAGATACGCATTTGCGCACCCCCCTTGAGGCAAACATTCTCCAAGATGGGCAAGCGGAA
ACGTGGCTGATTGCCGGCAGCGGGGTCAGCGGCGAAAAAAAGAAGCGATATGAGAGCAAAAACGTGCAAGTAATTTCTAT
GAGCACGCCGCATATTAACATCGATGAATTGCTGCACGTGCTTGGCGAGAGACGGATTACTTCCCTTTTTGTCGAAGGCG
GGTCACGCGTGCACGATAGTTTTGTGCGCGCTGGAGCGGTTAACGAAATTGTCGCATATTTTGCTCCGAAGCTCATCGGC
GGAAAACAAGCACCGACGCCGATCGGGGGGATAGGTTTTGCCAGCATGGCCGACGTGATGCAGCTGCAAATCCGGCGCGT
CGAAACGATCGGCCCGGATATCAAAATCGTCGCGATACCAAAATAA

Protein sequence :
MRNDEQYMRLAIEMAKAGIGQTSPNPIVGAVVVNSGEIVGFGAHLKAGEPHAEVHAIRMAGEKAKGATVYVTLEPCSHYG
KTPPCADLLIDAGVRRVVIATTDPNPLVAGKGIEKLRNAGIDVKLGVLKEEADELNRVFFHYIATKTPFVTLKYASSLDG
KIATATGESKWITSEAAREDVHRYRAVHDAILVGVDTVIADNPSLTVRLPGSGKNPIRIVLDTHLRTPLEANILQDGQAE
TWLIAGSGVSGEKKKRYESKNVQVISMSTPHINIDELLHVLGERRITSLFVEGGSRVHDSFVRAGAVNEIVAYFAPKLIG
GKQAPTPIGGIGFASMADVMQLQIRRVETIGPDIKIVAIPK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00289 YP_008207754.1 Pyrimidine deaminase Not tested AbaR25 Protein 9e-60 43
BJAB0868_00293 YP_008211619.1 Pyrimidine deaminase Not tested AbaR26 Protein 9e-60 43