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Name : Geoth_0116 (Geoth_0116) Accession : YP_004586257.1 Strain : Geobacillus thermoglucosidasius C56-YS93 Genome accession: NC_015660 Putative virulence/resistance : Unknown Product : NusG antitermination factor Function : - COG functional category : K : Transcription COG ID : COG0250 EC number : - Position : 116338 - 116871 bp Length : 534 bp Strand : + Note : TIGRFAM: Transcription antitermination protein, NusG; PFAM: Transcription antitermination protein, NusG, N-terminal; KOW; KEGG: gmc:GY4MC1_0096 NusG antitermination factor; SMART: Transcription antitermination protein, NusG, N-terminal; KOW DNA sequence : ATGGAAAAAAACTGGTATGTCATTCATACGTATTCAGGCTATGAAAATAAAGTGAAAGCCAATTTGGAAAAGCGCGTTGA GTCTATGGGGATGCAAGATAAAATTTTCCGCATCGTCGTTCCTGAAGAAACGGAGACAGAAACAAAGAGCGGCAAAAAGA AAGCGGCAAAAAGAAAAGTATTCCCGGGGTACGTGCTGGTCGAGATGGTGATGACCGATGATTCGTGGTATGTAGTGCGC AATACGCCAGGGGTAACGGGATTTGTCGGCTCAAGCGGAGCTGGTTCCAAACCGACACCGCTTCTTGAAGAAGAAGTTGA AATGATTTTAAAACGGATGGGTATGCAGCTTGCTGAGCTGGATGTTGATTATGAATTAAAAGAAACGGTAAGAGTGAAAG AAGGTCCTTTTGCCAATTTTACGGGTACAATTGAAGAAATCGATGTGGATAAAAGAAAAGTAAAAGTGCTTGTCAATATG TTCGGCCGCGAAACGCCAGTGGAATTTGAGTTTTCGCAAATTGAAAAAATATGA Protein sequence : MEKNWYVIHTYSGYENKVKANLEKRVESMGMQDKIFRIVVPEETETETKSGKKKAAKRKVFPGYVLVEMVMTDDSWYVVR NTPGVTGFVGSSGAGSKPTPLLEEEVEMILKRMGMQLAELDVDYELKETVRVKEGPFANFTGTIEEIDVDKRKVKVLVNM FGRETPVEFEFSQIEKI |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| nusG | YP_006310753.1 | transcription antitermination protein NusG | Not tested | FWisland_4 | Protein | 5e-39 | 52 |
| nusG | YP_281502.1 | transcription antitermination protein NusG | Not tested | Not named | Protein | 8e-35 | 49 |
| BJAB07104_00341 | YP_008207806.1 | Transcription antiterminator | Not tested | AbaR25 | Protein | 4e-28 | 42 |
| BJAB0868_00345 | YP_008211671.1 | Transcription antiterminator | Not tested | AbaR26 | Protein | 4e-28 | 42 |
