Gene Information

Name : Geoth_0975 (Geoth_0975)
Accession : YP_004587054.1
Strain : Geobacillus thermoglucosidasius C56-YS93
Genome accession: NC_015660
Putative virulence/resistance : Unknown
Product : ribonuclease PH
Function : -
COG functional category : J : Translation, ribosomal structure and biogenesis
COG ID : COG0689
EC number : 2.7.7.56
Position : 950382 - 951152 bp
Length : 771 bp
Strand : +
Note : PFAM: Exoribonuclease, phosphorolytic domain 1; Exoribonuclease, phosphorolytic domain 2; TIGRFAM: Ribonuclease phosphorolytic, bacterial-type; HAMAP: Ribonuclease phosphorolytic, bacterial-type; KEGG: gmc:GY4MC1_0905 ribonuclease PH

DNA sequence :
ATGAGAGTAGATGGTAGAGAAAACAAACAGCTTCGTCCTGTACATATGGAAAAACATTTTATAAAACACGCGGAAGGATC
GGTATTTATTACGGTTGGCGATACAAAAGTGATTTGCACAGCAAGTATCGATGATAAAGTGCCGCCGTTTATGCGCGGTG
GTGGAAAAGGATGGATTACTGCGGAATATGCGATGCTGCCACGGGCGACAGAGCAGCGGAACGTGCGGGAATCCAGCAAA
GGAAAAGTATCGGGGCGGACAATGGAAATCCAGCGCCTTATCGGCAGGGCGCTTCGTTCTGTTGTTAATTTGGACAAATT
AGGCGAGAAAACAGTATGGATCGACTGTGATGTCATTCAAGCGGATGGGGGGACGCGGACCGCATCGATTACAGGGGCAT
ATGTGGCGATGGTGTTAGCGTTTGCGAAATTAGTCGAAGAAAAGAAACTCGATGAACTTCCTGTTAACGATTTTTTAGCC
GCTACATCTGTTGGGATCGACCCAGAGCATGGGATCATTCTTGACTTAAACTACACGGAAGATGCCCGGGCGGAAGTCGA
CATGAATGTGGTGATGACAGGAGCCGGCCGTTTTGTTGAGATTCAAGGGACAGGAGAAGAAGCGACATTTTCGCGGGAAC
AATTAAACGAATTGTTAGATACCGCAGAAGTGGGAATTCGGCAGCTGATCGATATTCAGCGGAAAACGTTAGGGGAACTT
GCGGCGCAAATTGACATAAAGCGAAGCCAAGAAAGCGGGGATGTGTCATGA

Protein sequence :
MRVDGRENKQLRPVHMEKHFIKHAEGSVFITVGDTKVICTASIDDKVPPFMRGGGKGWITAEYAMLPRATEQRNVRESSK
GKVSGRTMEIQRLIGRALRSVVNLDKLGEKTVWIDCDVIQADGGTRTASITGAYVAMVLAFAKLVEEKKLDELPVNDFLA
ATSVGIDPEHGIILDLNYTEDARAEVDMNVVMTGAGRFVEIQGTGEEATFSREQLNELLDTAEVGIRQLIDIQRKTLGEL
AAQIDIKRSQESGDVS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
rph YP_001800860.1 ribonuclease PH Not tested Not named Protein 3e-60 58