Gene Information

Name : FsymDg_4467 (FsymDg_4467)
Accession : YP_004585637.1
Strain : Frankia sp. 4085684
Genome accession: NC_015656
Putative virulence/resistance : Unknown
Product : aspartate transaminase
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG0436
EC number : 2.6.1.1
Position : 5219225 - 5220496 bp
Length : 1272 bp
Strand : +
Note : KEGG: fra:Francci3_0064 aminotransferase AlaT; PFAM: Aminotransferase, class I/II

DNA sequence :
ATGGAGTTCACCCAGTCCGACAAGCTCACCGGCGTCTGCTACGACGTCCGGGGCCCCGTCCTGGACCAGGCGACGAAGCT
GGAAGCCGCTGGTCAGCGCATCCTCAAACTGAACATCGGCAACCCGGCGCCGTTCGGGTTCCACGCGCCACCGGCGGTCC
TTGAGGCAGTGGTGAACGGCCTCGCCGAGGCACAGGGCTACAGCGACTCCAAGGGCCTGCTCTCAGCCCGCACGGCCGCG
GTCCGGTACGCGAACGGAAAGGGCATCACCGGTATCGATCCCGACGGGGTCTACCTCGGCAACGGCGTCTCAGAACTGAT
CATGATGTCGCTGCAGGCGCTGCTCAACGACGGCGACGAAGTGCTGCTCCCGGCGCCGGACTACCCGCTGTGGACAGCCG
TGGTCAGCCTGTGTGGCGGGCGGCCCGTCCACTACCTGTGCGACGAGTCGGCCGGTTGGATGCCGGACCTCGACGCCCTG
GCCAGCAGGATCACCACGCGCACCCGTGCGATCGTAGTGATCAACCCGAACAATCCCACCGGCGCGGTCTACGACCGTGA
GATCCTCGAGGGCATCGTCGAACTCGCCCGCCAGCACAACCTGATGATCTTCTCGGACGAGATCTACGACCGGATCCTCT
ACGACGACGCCGAGCACATCTCCACCGCGGCCCTCGCCCCGGACGTCGTGTGCGTGACGTTCAACGGGCTGTCCAAGGCA
TACCGGCTGGCCGGCTTCCGCTCCGGCTGGATGGTGCTCTCGGGCCCGCGCACGCACGCGTCCAGCTATGTCGAGGGGCT
CAACATCCTGGCCAACATGCGGCTGTGCGCCAACGTCCCGGGCCAGTTCGCCATGCGGGCCGCGCTCGAGGACGACAGCG
GCGCGGGCGACCTCGTCCTGCCCGGTGGCCGCCTGCACGAGCAGCGGGACGTGGTGTGGAAGCTGCTCAACGACATTCCG
GGCGTGTCGTGCGTGAAGCCGAAAGGGGCGCTGTACGCGTTCCCGCGGCTCGATCCGGACGTCTACCCGGTCACCGACGA
CGAACGGCTCGTCCTGGACCTGCTCCTGGCCGAAAAAATCATGGTTGTGCAGGGCACGGGTTTCAACTGGCCGCGACCCG
ATCACTTCCGGATCGTCACGTTGCCGGACGTGGACGACCTCACCGACGCGGTGAGCCGCATCAGCAGGTTCCTCACCGCC
TACGCCCAGGGGGAAACGGTCCACCGCCGGGACGGACTGCCCACCTTCGAGCCACAACACGTGCCGAGCTGA

Protein sequence :
MEFTQSDKLTGVCYDVRGPVLDQATKLEAAGQRILKLNIGNPAPFGFHAPPAVLEAVVNGLAEAQGYSDSKGLLSARTAA
VRYANGKGITGIDPDGVYLGNGVSELIMMSLQALLNDGDEVLLPAPDYPLWTAVVSLCGGRPVHYLCDESAGWMPDLDAL
ASRITTRTRAIVVINPNNPTGAVYDREILEGIVELARQHNLMIFSDEIYDRILYDDAEHISTAALAPDVVCVTFNGLSKA
YRLAGFRSGWMVLSGPRTHASSYVEGLNILANMRLCANVPGQFAMRAALEDDSGAGDLVLPGGRLHEQRDVVWKLLNDIP
GVSCVKPKGALYAFPRLDPDVYPVTDDERLVLDLLLAEKIMVVQGTGFNWPRPDHFRIVTLPDVDDLTDAVSRISRFLTA
YAQGETVHRRDGLPTFEPQHVPS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
aspC YP_005682179.1 Aminotransferase AlaT Not tested PiCp 7 Protein 1e-123 60
aspC YP_005684271.1 Aminotransferase AlaT Not tested PiCp 7 Protein 1e-123 60
aspC YP_003784329.1 aspartate aminotransferase Not tested PiCp 7 Protein 1e-123 60
aspC YP_005686363.1 Aminotransferase AlaT Not tested PiCp 7 Protein 1e-123 60