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Name : FsymDg_4406 (FsymDg_4406) Accession : YP_004585580.1 Strain : Frankia sp. 4085684 Genome accession: NC_015656 Putative virulence/resistance : Virulence Product : ATPase AAA-2 domain-containing protein Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG0542 EC number : - Position : 5137144 - 5139648 bp Length : 2505 bp Strand : + Note : KEGG: fre:Franean1_0190 ATPase; PFAM: ATPase associated with various cellular activities, AAA-2; Clp, N-terminal; ATPase, AAA-type, core; UvrB/UvrC protein; Clp ATPase, C-terminal; SMART: ATPase, AAA+ type, core DNA sequence : ATGTTCGAGAGATTCACCGACCGGGCACGTCGGGTCGTCGTCCTGGCACAGGAAGAAGCCAGGATGCTCAACCACAACTA CATCGGGACCGAACACATCCTGCTCGGGCTGATCCACGAGGGCGAGGGTGTCGCCGCCAAGGCGCTGGAGTCCCTGGGCA TCTCCCTCGAGGGTGTTCGGTCACAGGTCGAGGAGATCATCGGGCAGGGGCAACAGGCCCCGAGCGGGCACATCCCGTTC ACTCCGCGCGCCAAGAAGGTGCTGGAGCTGTCCCTGCGGGAGGCCCTGCAGCTCGGCCACAACTACATCGGGACCGAGCA CATCCTGCTCGGGCTGATCCGGGAGGGCGAGGGCGTCGCCGCCCAGGTCCTGGTCAAGCTCGGCGCCGACCTCAACCGGG TCCGCCAGCAGGTCATCCAGCTGCTGTCCGGCTACCAGGGCAAGGGCGACCCGGCGACGGCGGGTGCGCCGTCGGAGGGC ACTCCGTCCACCTCGCTCGTGCTCGACCAGTTCGGCCGCAACCTCACCGCGGCCGCGCGCGAGTCCAAGCTCGACCCGGT GATCGGGCGCGAGAAGGAGATCGAGCGCGTCATGCAGGTGCTGTCGCGCCGGACCAAGAACAACCCGGTCCTGATCGGGG AGCCCGGCGTCGGCAAGACCGCCGTGGTCGAGGGGCTGGCCCAGGCGATCGTCAAGGGCGAGGTGCCCGAGACCCTCAAG GACAAGCAGCTGTACACGCTTGACCTCGGCGCGCTGGTCGCCGGGTCCCGCTACCGCGGTGACTTCGAGGAGCGGCTGAA GAAGGTCCTCAAGGAGATCCGCACCCGCGGCGACATCATCCTGTTCATCGACGAGCTGCACACGCTCGTCGGCGCGGGCG CCGCCGAGGGCGCGATCGACGCCGCGTCCATCCTCAAGCCGATGCTGGCCCGCGGCGAGCTGCAGACGATCGGTGCCACC ACCCTGGACGAGTACCGCAAGCACCTGGAGAAGGACGCCGCGCTCGAGCGGCGGTTCCAGCCGATCCAGGTCGCGGAGCC GTCGGTGGCGCACACCATCGAGATCCTCAAGGGCCTGCGGGACCGCTACGAGGCGCACCACCGTGTGTCGATCACCGACG GTGCCCTGGTCGCGGCCGCCTCCCTGGCCGACCGCTACATCTCCGACCGGTTCCTGCCGGACAAGGCGATCGACCTCATC GACGAGGCCGGCTCGCGGATGCGCATCCGCCGGATGACCGCTCCGCCGGACCTGCGCGAGTTCGACGAGCGCATCGCCAA CGTCCGCCGGGACAAGGAGTCCGCGATCGACGCGCAGGACTTCGAGAAGGCCGCCTCCCTGCGTGACCGGGAGAAGACCC TGCTGGCGGAGAAGGCCAAGCGGGAGAAGGAATGGAAGGCCGGCGACATGGACGTCGTCGCCGAGGTCGGCGACGAGGAG ATCGCCGAGGTCCTGGCGATCTGGACGGGTATCCCGGTGTTCAAGCTCACCGAGGAGGAGACCGCCCGGCTGCTGCGCAT GGAGGACGAGCTGCACCGCCGCGTCATCGGCCAGCAGCAGGCGATCAAGGCTGTCTCCCAGGCGATCCGGCGTACCCGGG CGGGTCTGAAGGACCCCAAGCGTCCCGGCGGTTCGTTCATCTTCGCCGGCCCGTCCGGTGTCGGTAAGACCGAGCTGTCC AAGACGCTGGCGGAGTTCCTCTTCGGCGACGAGGACGCGCTGATCCAGCTCGACATGTCCGAGTACATGGAGAAGCACAC CGTCTCCCGGCTGGTGGGCTCCCCGCCCGGCTACGTCGGCTACGAGGAGGGCGGCCAGCTCACCGAACGGGTCCGGCGCA AGCCGTTCTCGGTCGTCCTGTTCGACGAGGTCGAGAAGGCGCACCCGGACGTGTTCAACACCCTCCTGCAGATCCTGGAG GACGGCCGGCTGACCGACTCCCAGGGCCGGCTGGTCGACTTCAAGAACACCGTTCTGATCATGACCTCGAACCTGGGCAC CCGGGACATCTCCAAGGGCCCGGGCATCGGGTTCGCGACCGGTCAGGGCGCCATCGACTACGAGCGGATGAAGGCGAAGG TCCAGGACGAGCTCAAGCAGCACTTCCGGCCCGAGTTCCTCAACCGGATCGACGACATCATCGTCTTCCACCAGCTGTCC GAGGCCGAGATCATCCAGATCGTCGACCTCATGCTGGCCCGGGTGGACATCCAGTTGAAGAACAAGGACATGGCGCTCGA GCTCACCCCGGCGGCGAAGGCGCTGCTGGCCAAGAAGGGCTACGACCCGGTGCTCGGCGCCCGGCCGCTGCGCCGGACGA TCCAGCGGGAGATCGAGGACGTCCTGTCCGAGAAGATCCTGTACGGGACGCTCAAGCCCGGTGAGATCGTGGTCGGTGAC GTCGAGGGCGAGGGCGAGGCGGCGAAGTTCGTCTTCCGCGGCGAACCGAAGCCCACCCAGGTCCCCGACGCCCCTCCGAT CGACCTGGCCAAGTCCAGCGAGTAG Protein sequence : MFERFTDRARRVVVLAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKALESLGISLEGVRSQVEEIIGQGQQAPSGHIPF TPRAKKVLELSLREALQLGHNYIGTEHILLGLIREGEGVAAQVLVKLGADLNRVRQQVIQLLSGYQGKGDPATAGAPSEG TPSTSLVLDQFGRNLTAAARESKLDPVIGREKEIERVMQVLSRRTKNNPVLIGEPGVGKTAVVEGLAQAIVKGEVPETLK DKQLYTLDLGALVAGSRYRGDFEERLKKVLKEIRTRGDIILFIDELHTLVGAGAAEGAIDAASILKPMLARGELQTIGAT TLDEYRKHLEKDAALERRFQPIQVAEPSVAHTIEILKGLRDRYEAHHRVSITDGALVAAASLADRYISDRFLPDKAIDLI DEAGSRMRIRRMTAPPDLREFDERIANVRRDKESAIDAQDFEKAASLRDREKTLLAEKAKREKEWKAGDMDVVAEVGDEE IAEVLAIWTGIPVFKLTEEETARLLRMEDELHRRVIGQQQAIKAVSQAIRRTRAGLKDPKRPGGSFIFAGPSGVGKTELS KTLAEFLFGDEDALIQLDMSEYMEKHTVSRLVGSPPGYVGYEEGGQLTERVRRKPFSVVLFDEVEKAHPDVFNTLLQILE DGRLTDSQGRLVDFKNTVLIMTSNLGTRDISKGPGIGFATGQGAIDYERMKAKVQDELKQHFRPEFLNRIDDIIVFHQLS EAEIIQIVDLMLARVDIQLKNKDMALELTPAAKALLAKKGYDPVLGARPLRRTIQREIEDVLSEKILYGTLKPGEIVVGD VEGEGEAAKFVFRGEPKPTQVPDAPPIDLAKSSE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| clpC | YP_005163377.1 | ATP-dependent Clp protease ATP-binding subunit | Not tested | Not named | Protein | 0.0 | 77 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| FsymDg_4406 | YP_004585580.1 | ATPase AAA-2 domain-containing protein | VFG0079 | Protein | 0.0 | 63 |
| FsymDg_4406 | YP_004585580.1 | ATPase AAA-2 domain-containing protein | VFG0080 | Protein | 9e-149 | 51 |
