Gene Information

Name : FsymDg_4258 (FsymDg_4258)
Accession : YP_004585440.1
Strain : Frankia sp. 4085684
Genome accession: NC_015656
Putative virulence/resistance : Resistance
Product : phosphonate-transporting ATPase
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : 3.6.3.28
Position : 4972805 - 4973704 bp
Length : 900 bp
Strand : +
Note : PFAM: ABC transporter-like; KEGG: fal:FRAAL6466 ABC-type transport systems, involved in lipoprotein release, ATPase components; SMART: ATPase, AAA+ type, core

DNA sequence : 
GTGGCCGAGAGCGGATCACTCCTCGCCGAGCCGCCGGCCGGCTCGCCACCCGTCATCGAACTCGACGGTGTTCGCAAGAC
CTACCGGACCGGCGCCATCGAGGTCGACGCGCTGCGCGGCGTCGACCTGCGCATCTCCGAGGGAGAGTACATAGCGATCA
TGGGCCCGTCCGGGTCGGGGAAGTCGACCCTGATGAACATCCTCGGCTGCCTCGACATACCCACCGCGGGCCACTATCGC
CTTGCTGGCGAGGACGTCGCCCGGATGTCCGAGGACGCTCTCGCCGAGATCCGCAACCGGCGGATCGGCTTCGTCTTCCA
GCAGTTCAACCTGCTTCCCACCCTGTCCGCGTGGCGCAACGTGGAGCTGCCGTTGTGCTACGCCGGGACGGGACGGGCGC
AGCGTCGCGTCCGGGCGATCGAGGCGCTGGAGAAGGTGGGCTTGGGGGACCGGATCGCCCACCGCCCGAACGAGCTCTCC
GGCGGCCAGCAGCAGCGGGTCGCCGTCGCCCGGGCGCTGGTCACCGACCCCGCGCTCATCCTCGCCGACGAACCGACCGG
CAACCTCGACAGCGCGTCCACCCAGGACGTGCTCGACCTGCTCGGCGAGTTACACGCGTCCGGCCGCACGATCGTGCTCA
TCACCCACGAGCCCGAGGTCGCCGCCACCGCCGGCCGGGTGGTGCGCATCCGGGACGGCGGCATCCAGTACGACACCAGC
TCTGATCATCCGAGTGACGACGCCGACGGGCCCGGGGACGTCGGATTCGGCGCCAGCGCCGGGTTCGGAGCCGTCGCCGG
CCCGGGCCCCGTTCCCGTGCCTGTGCTCGGGCCCGAGCACAGGCACGGGAAGGCAGCCCATGGCGACCTGGCCCGGCTCA
CCTGGGTGATCCGCCCATGA

Protein sequence : 
MAESGSLLAEPPAGSPPVIELDGVRKTYRTGAIEVDALRGVDLRISEGEYIAIMGPSGSGKSTLMNILGCLDIPTAGHYR
LAGEDVARMSEDALAEIRNRRIGFVFQQFNLLPTLSAWRNVELPLCYAGTGRAQRRVRAIEALEKVGLGDRIAHRPNELS
GGQQQRVAVARALVTDPALILADEPTGNLDSASTQDVLDLLGELHASGRTIVLITHEPEVAATAGRVVRIRDGGIQYDTS
SDHPSDDADGPGDVGFGASAGFGAVAGPGPVPVPVLGPEHRHGKAAHGDLARLTWVIRP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 4e-35 44
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 4e-36 44
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 4e-36 44
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 4e-36 44

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
FsymDg_4258 YP_004585440.1 phosphonate-transporting ATPase NC_012469.1.7686878. Protein 3e-60 55
FsymDg_4258 YP_004585440.1 phosphonate-transporting ATPase NC_008702.1.4606598. Protein 5e-49 54
FsymDg_4258 YP_004585440.1 phosphonate-transporting ATPase CP001581.1.gene798.p Protein 4e-41 45
FsymDg_4258 YP_004585440.1 phosphonate-transporting ATPase CP001581.1.gene598.p Protein 1e-39 43
FsymDg_4258 YP_004585440.1 phosphonate-transporting ATPase NC_012469.1.7686946. Protein 5e-29 41