Gene Information

Name : FsymDg_0036 (FsymDg_0036)
Accession : YP_004581549.1
Strain : Frankia sp. 4085684
Genome accession: NC_015656
Putative virulence/resistance : Virulence
Product : ABC transporter
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG4779
EC number : -
Position : 40869 - 42044 bp
Length : 1176 bp
Strand : -
Note : PFAM: Bacterial transport system permease protein; KEGG: sro:Sros_3466 ABC Fe+3-siderophore transporter, inner membrane subunit

DNA sequence : 
ATGGCCACCCCGACCACGAGCACGAGCAGGCCAGTGTCCGCGGCCACCTCCGCGGCTGCGGCCACAGCTGCCTCCACGGC
TGCGGCCAGCACAGCCGTGACCACGACCTACGGTCCGCTCAGCCTGAGCCGTGTCGGCGGCCGCACCGCCGTGCGGCTGG
CCCGGCCCGCCGCGTCCGCCGTGCTGCGGCCACGGCTGGTGACGGTCTGTGCCGTCCTGGCCGCCGCCGCGTTCGCCGTC
TTCTGCCTGGGGATCGCGTTCGGTGACTATCCGATCGGCATCGCCGAGGTCGTCCCGGCGCTGTGGGGGTCAGGGGACCC
CGGAGCGCTGTTCGTCGTGCGTGAACTCCGGCTGCCTCGGGCCCTGGTCGGGCTTCTCGTCGGTGTCGCCTTCGGCATCT
CCGGCGCGGTGTTCCAGACCATGACCCGTAACCCGCTCGCCAGCCCCGACATGATCGGGATAACCGCCGGCGCGCAGACC
GCGGTCGTCGCGGACATCGTGCTCGGCTTCGGTGCCGGCCTCGGCAGCCAGCTGCTCGGCCTGATCGGCGGCCTCGCCAC
AGCGCTGGTGATCTATCTGCTGGCCTGGAAGGGCGGCACCTCCGGATACCGGATCATCCTGGTGGGCATCGGGGTGTCCT
GGCTGTGCAGCAGCGCCACCGACTACCTGCTGGCCAGGGCCCGCCTTGCCGAGGCCGGGCAGGCCCTGGGCTGGCTGGTC
GGCAACCTCAACGGCAGGAACTTCGACCAGGCCCGCCCGTTGGCGCTGGCCATGGCCGTGCTCGCCCCGGTCGCGCTGGC
GCTCGGCCGGGTCACCCGCACCCTCCAGCTCGGCGACGAGGTCGCGTCCGGGCTGGGGGTCCCGGTCCAGCGCACCAGGC
TGGCACTTATGATCACAGCGGTCGGACTGGTCGCCTTCGCTACCGCCGCGGCCGGGCCGATCGTCTTCGTGGCGCTGGCC
GCCCCGCAGATCGCGCAGCGGCTGGCGAACCTCGCCTGGCCGCCCCCGCTCGCCTCCGGTCTCGCCGGAGCACTGATCGT
GCTGTCCGCCGACCTGATCGGATGCCAGCTCCTGTCCGAAACCGAACTGCCGGTCGGCGTGGTGACCGGCGTGCTGGGCG
CACCGTTCCTGCTCTGGCTGCTCGGCCGGGCGAACCGCACCGACTCCGGAGGCTGA

Protein sequence : 
MATPTTSTSRPVSAATSAAAATAASTAAASTAVTTTYGPLSLSRVGGRTAVRLARPAASAVLRPRLVTVCAVLAAAAFAV
FCLGIAFGDYPIGIAEVVPALWGSGDPGALFVVRELRLPRALVGLLVGVAFGISGAVFQTMTRNPLASPDMIGITAGAQT
AVVADIVLGFGAGLGSQLLGLIGGLATALVIYLLAWKGGTSGYRIILVGIGVSWLCSSATDYLLARARLAEAGQALGWLV
GNLNGRNFDQARPLALAMAVLAPVALALGRVTRTLQLGDEVASGLGVPVQRTRLALMITAVGLVAFATAAAGPIVFVALA
APQIAQRLANLAWPPPLASGLAGALIVLSADLIGCQLLSETELPVGVVTGVLGAPFLLWLLGRANRTDSGG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
iusC YP_005143744.1 iron ABC transporter permease Virulence Not named Protein 5e-26 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
FsymDg_0036 YP_004581549.1 ABC transporter VFG0928 Protein 4e-28 42