Gene Information

Name : FsymDg_3486 (FsymDg_3486)
Accession : YP_004584697.1
Strain : Frankia sp. 4085684
Genome accession: NC_015656
Putative virulence/resistance : Virulence
Product : aldehyde dehydrogenase
Function : -
COG functional category : C : Energy production and conversion
COG ID : COG1012
EC number : -
Position : 4109433 - 4110950 bp
Length : 1518 bp
Strand : -
Note : PFAM: Aldehyde dehydrogenase; KEGG: nfa:nfa29950 putative aldehyde dehydrogenase

DNA sequence : 
ATGGCATACACCCCGCCAGGCGCCGAGGGCAGCATCGTTCAGTTCGCCCAGCGCTACGAGAACTTCATCGGTGGCACGTG
GGTGCCCCCGACCGAGGGCCGCTACTTCGCCAATCCCTCACCGGTCAACGGTCAGGTGTTCTGTGAGGTCGCCCGCTCCA
GTGCCGCGGACATCGACCTCGCCCTGGACGCCGCGCACGCCGCCGCGGCGAAGTGGGGCCGGACATCGGTGACCGAACGC
GCCAACATCCTCAACCGGATCGCGGATCGGATCGAGCAGAACCTGGAGAAGCTCGCGGTCGCCGAGACCTGGGACAACGG
CAAGCCGGTCCGCGAGACGCTGGCCGCCGACCTGCCGCTCGCGGTGGACCACTTCCGGTACTTCGCGGGGGCGGTGCGAG
CCCAGGAGGGCAGCATCGGAGAGATCGACGCGGACACGGTCGCCTATCACTTCCAGGAACCGCTTGGCGTGGTCGGTCAG
ATCATCCCGTGGAACTTCCCCATCCTGATGGCCGCGTGGAAGCTCGCACCCGCGCTGGCAGCCGGCAACTGTGTGGTGAT
CAAGCCTGCCGAGCAGACTCCGGCCAGCCTGCTGCTTGTGGTCGAGCTGATCGCCGACCTCCTGCCGCCGGGGGTGCTGA
ACGTGGTCAACGGCTTCGGCGTCGAGGCGGGCAAGCCGCTGGCCTCGAGCGGCCGGGTCGCCAAGATCGCGTTCACCGGT
GAAACCACCACCGGGCGACTGATCATGCAGTACGCCAGCGAGAACATCATCCCGGTGACCCTTGAGCTGGGCGGCAAGAG
CCCGAACATCTTCCTGCCGGACGTGCTGGCCGCCGACGACGACTTCCTGGACAAGGCCGTCGAGGGTTTCGTCCTGTTCG
CGTTGAACCAGGGTGAAGTATGCACCTGCCCGTCCCGCGCGCTGATCGCCTCCTCGATCTACGACGAGTTCATTGGCCGC
TGCATCGAGCGGACCAGGGCGATCGTGGGCGGCGACCCGCTCGATCCCGCCACCATGATCGGCGCTCAGGCCAGCAACGA
TCAGTACGAGAAGATCCTTTCCTATATCGACATCGGCATCAGGGAGGGCGCCGAGATCCTCACCGGCGGCAGCCCCCGCA
AGGTCGACGGCCTCGAGGGCGGCTACTACGTCGAGCCGACAGTCTTCCGGGGCACCAACGACATGCGGATCTTCCAGGAG
GAGATCTTCGGTCCGGTCGTGTCGGTGACCACGTACGACTCGCCGGACGAGGCGCTCAAGCTGGCCAACGACACGCTCTA
CGGTCTCGGTGCCGGGGTGTGGAGCCGGGACATCAACACCGCGTACCGGTTCGGCCGGGAAATCAGGGCCGGTCGGGTAT
GGGTGAGCAACTATCACTCCTATCCCGCGCACGCGGCGTTCGGTGGGTACAAGAAGTCCGGGATCGGCCGGGAAACCCAC
CGGATGATGCTGGACCACTACCAGCAGACCAAGAACCTGCTGGTCAGTTACTCGCCGAAGAAGCTCGGCTTCTTCTGA

Protein sequence : 
MAYTPPGAEGSIVQFAQRYENFIGGTWVPPTEGRYFANPSPVNGQVFCEVARSSAADIDLALDAAHAAAAKWGRTSVTER
ANILNRIADRIEQNLEKLAVAETWDNGKPVRETLAADLPLAVDHFRYFAGAVRAQEGSIGEIDADTVAYHFQEPLGVVGQ
IIPWNFPILMAAWKLAPALAAGNCVVIKPAEQTPASLLLVVELIADLLPPGVLNVVNGFGVEAGKPLASSGRVAKIAFTG
ETTTGRLIMQYASENIIPVTLELGGKSPNIFLPDVLAADDDFLDKAVEGFVLFALNQGEVCTCPSRALIASSIYDEFIGR
CIERTRAIVGGDPLDPATMIGAQASNDQYEKILSYIDIGIREGAEILTGGSPRKVDGLEGGYYVEPTVFRGTNDMRIFQE
EIFGPVVSVTTYDSPDEALKLANDTLYGLGAGVWSRDINTAYRFGREIRAGRVWVSNYHSYPAHAAFGGYKKSGIGRETH
RMMLDHYQQTKNLLVSYSPKKLGFF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
VC0819 NP_230467.2 aldehyde dehydrogenase Not tested VPI-1 Protein 2e-134 64
aldA ACK75577.1 aldehyde dehydrogenase Not tested VPI Protein 1e-91 63
aldA ACK75588.1 aldehyde dehydrogenase Not tested VPI Protein 7e-92 63
aldA AAC12273.1 aldehyde dehydrogenase Virulence VPI Protein 4e-143 63
aldA AAK20747.1 aldehyde dehydrogenase Virulence VPI Protein 4e-143 63
aldA AAK20776.1 aldehyde dehydrogenase Virulence VPI Protein 4e-143 63
aldA ACK75574.1 aldehyde dehydrogenase Not tested VPI Protein 2e-91 63
aldA ACK75590.1 aldehyde dehydrogenase Not tested VPI Protein 2e-91 63
aldA ACK75596.1 aldehyde dehydrogenase Not tested VPI Protein 2e-91 63
aldA-1 YP_001216300.1 aldehyde dehydrogenase Not tested VPI-1 Protein 2e-142 63
aldA ACK75585.1 aldehyde dehydrogenase Not tested VPI Protein 7e-91 62
aldA ACK75593.1 aldehyde dehydrogenase Not tested VPI Protein 7e-91 62
aldA ACK75582.1 aldehyde dehydrogenase Not tested VPI Protein 1e-91 62
ORF SG19 AAN62241.1 putative aldehyde dehydrogenase Not tested PAGI-3(SG) Protein 8e-59 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
FsymDg_3486 YP_004584697.1 aldehyde dehydrogenase VFG0082 Protein 7e-135 64