Gene Information

Name : FsymDg_3229 (FsymDg_3229)
Accession : YP_004584456.1
Strain : Frankia sp. 4085684
Genome accession: NC_015656
Putative virulence/resistance : Virulence
Product : glutamine synthetase, type I
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG0174
EC number : 6.3.1.2
Position : 3822917 - 3824341 bp
Length : 1425 bp
Strand : +
Note : TIGRFAM: Glutamine synthetase type I; KEGG: fre:Franean1_1770 glutamine synthetase, type I; PFAM: Glutamine synthetase, catalytic region; Glutamine synthetase, beta-Grasp

DNA sequence : 
ATGTTCACAAACGCCGAGGACGTACTTCGCTACATCGCGGACCAGAACATCGAATTCGTCGACGTTCGCTTCTGTGACCT
TCCTGGGATTCTGCAGCACTTTACGATCCCGGTCGAGGTCTTCTCCGCGTCGGTGTTCACCGACGGCCTGATGTTCGACG
GGTCCTCGATACGCGGGTTCCAGGCGATCCACGAGTCCGACATGCTGCTGCTACCGGATCCGACCACGGCCTTCGTCGAT
CCGTTCCGTGAGCACCCGACGCTCGCGATAACCTTCTTCATCCATGACCCGATCACTCGGGAGGAGTACTCCCGGGACCC
GCGCAACACCGCGAGGAAGGCCGAGGCCTACCTGCGGGGCACCGGTTTCGCGGACACCGCCTACTTCGGCCCGGAGGCGG
AGTTCTACATATTTGACGACGTACGCTACGACTACAATCCATATGGCTCCCTGCACGCCGTGGACTCCGTCGAGGCGGCC
TGGAACACCGCCCGTAAGGAGGAGGGTGGGAACCTCGGCTACAAGCCCAGGTTCAAGGGGGGTTATTTCCCGGTTCCGCC
GACCGACCACTTCACCGACCTGCGCTCGGAGATGACCCGGACCCTGATAAGGGCCGGGGTCACCGTCGAGATGCAGCATC
ACGAGGTGGGCACCGCCGGGCAGGCGGAGATAGACATTCGTTACGACACTCTGCTGCGGACCGCCGACAACCTGATGCTC
TACAAGTACATCATTCGTAATGTCGCGGTCGCCCGTGGCAAGACCGTGACCTTCATGCCGAAGCCGCTCTTCGAGGACAA
CGGCTCGGGGATGCACGTCCACCAGAGCCTGTGGCAGGGTGACGAGCCGCTGTTCTACAGCGAGAGCGGCTACGGTGGCC
TGTCGGAGCTCGCCCGCTTCTACATCGGTGGGCTGTTGCACCACGCGCCGGCGCTGCTGGCGTTCACCAATCCGACCACG
AACTCCTACCGACGGCTGGTGCCGGGCTATGAGGCACCGGTCAACCTGGTCTATTCGGCGCGTAACCGTTCGGCCAGCTG
CCGCATACCGCTCAGCGGCGTCTCGCCCAAGGCGAAGCGGATCGAGTTCCGGGTCCCCGACCCGAGCTGCAACCCGTACC
TGGCCTTCGCCGCGATGTTGATGGCCGGCGTGGACGGGATCCGTAACAAGATCGAGCCGCCGGACCCGATCGACAAGGAC
CTCTACGACCTTCCCCCGGACGAGCTGGCCGCTGTGCCGCAGGTGCCCGGATCGCTGGAGAAGGTACTCGACGCGCTCGA
GGCCGACCACGAGTTCCTGACCGAGGGGAACGTCTTCACCCCCGACCTGATCGAGACGTGGATCGACTACAAGCGCAAGA
ACGAGGTCGACGCGATCCGGCTCCGGCCGCATCCGTACGAGTTCCAGCTCTACTACGACATCTGA

Protein sequence : 
MFTNAEDVLRYIADQNIEFVDVRFCDLPGILQHFTIPVEVFSASVFTDGLMFDGSSIRGFQAIHESDMLLLPDPTTAFVD
PFREHPTLAITFFIHDPITREEYSRDPRNTARKAEAYLRGTGFADTAYFGPEAEFYIFDDVRYDYNPYGSLHAVDSVEAA
WNTARKEEGGNLGYKPRFKGGYFPVPPTDHFTDLRSEMTRTLIRAGVTVEMQHHEVGTAGQAEIDIRYDTLLRTADNLML
YKYIIRNVAVARGKTVTFMPKPLFEDNGSGMHVHQSLWQGDEPLFYSESGYGGLSELARFYIGGLLHHAPALLAFTNPTT
NSYRRLVPGYEAPVNLVYSARNRSASCRIPLSGVSPKAKRIEFRVPDPSCNPYLAFAAMLMAGVDGIRNKIEPPDPIDKD
LYDLPPDELAAVPQVPGSLEKVLDALEADHEFLTEGNVFTPDLIETWIDYKRKNEVDAIRLRPHPYEFQLYYDI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
glnA YP_003728749.1 glutamine synthetase Not tested cag PAI Protein 2e-88 44

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
FsymDg_3229 YP_004584456.1 glutamine synthetase, type I VFG1399 Protein 4e-154 66