|
Name : FsymDg_2737 (FsymDg_2737) Accession : YP_004584001.1 Strain : Frankia sp. 4085684 Genome accession: NC_015656 Putative virulence/resistance : Unknown Product : integrase catalytic subunit Function : - COG functional category : L : Replication, recombination and repair COG ID : COG2801 EC number : - Position : 3253452 - 3254342 bp Length : 891 bp Strand : + Note : PFAM: Integrase, catalytic core; KEGG: fre:Franean1_3089 integrase catalytic region DNA sequence : GTGATCGATAAGTTCGAGCTGATCGCCGCGGAGAAGGACAACTACCCGATACGCAAAATGTGCCAGTGGCTCGTGGTGTC GACGTCCGGTTTCTACGACTGGTACCAGCGACCGGTGTCGTCCCGGACCCGCCGGCACACCACCCTGGACACCCAGGTGC GGGCGTTGTTCGCCGCCTCGCGCCAGACCTACGGCGCGCGGCGGATCGCCGCCGCTCTGACCGCGTCGGGCCAGCCCACC TCGGTCCGCCTCGCCCGACGGATCATGCGCCGAGCAGGGCTGAAGGCCTGCCAGCCCAGGGCCTACCGCCGCACCACGAT CCCCGGCCAGGCGCCGGTGCCCACCGACCACGTCCGCCGCGACTTCACCGCCACCCGCCCCGGGGCCAAGCTCGTCGGTG ACATCACCTATGTCCGTACCGGCGAAGGCTGGCTGTATCTCGCCACGGTCATCGACTGCTATTCACGGAAGGTTCTCGGC TGGTCGATGGCCAGTCACATGCGGACCGAACTCGTCGTCGACGCATTCACCATGGCCGCGTCCCGCACCACCCTTGCACC GAACGCGGTTTTTCACTCGGATCGCGGTACGCAATACACGTCCGACGCCTACCATCGCACGCTGGCACGACACGGCGTGC GACCTTCCGTAGGCGCCACCGGAGTGTGCTGGGACAACTCCGCCGCCGAATCCTTCTTTGGCACCCTGAAAAACGAACTC GTCTATCGGGAAATTTACCTAACCCGTCGTGCCGCCCGCAGTGCGATCGCCGAGTACATCGAAGTCTTCTACAACCGGCA GCGACTCCACTCCACCCTCGGCTACCACACCCCGGAACACGTCGAACGTCTCTACCTGACGAGTCGGACATCAATACCAG AGGCGGCGTAA Protein sequence : MIDKFELIAAEKDNYPIRKMCQWLVVSTSGFYDWYQRPVSSRTRRHTTLDTQVRALFAASRQTYGARRIAAALTASGQPT SVRLARRIMRRAGLKACQPRAYRRTTIPGQAPVPTDHVRRDFTATRPGAKLVGDITYVRTGEGWLYLATVIDCYSRKVLG WSMASHMRTELVVDAFTMAASRTTLAPNAVFHSDRGTQYTSDAYHRTLARHGVRPSVGATGVCWDNSAAESFFGTLKNEL VYREIYLTRRAARSAIAEYIEVFYNRQRLHSTLGYHTPEHVERLYLTSRTSIPEAA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | AAL57581.1 | transposase 1 | Not tested | LEE | Protein | 1e-43 | 42 |
| unnamed | AAL57519.1 | transposase 1 | Not tested | LEE | Protein | 1e-43 | 41 |
| ECO111_3732 | YP_003236068.1 | putative IS3 transposase InsF | Not tested | LEE | Protein | 4e-43 | 41 |
