Gene Information

Name : FsymDg_2555 (FsymDg_2555)
Accession : YP_004583839.1
Strain : Frankia sp. 4085684
Genome accession: NC_015656
Putative virulence/resistance : Unknown
Product : pyridoxal biosynthesis lyase pdxS
Function : -
COG functional category : H : Coenzyme transport and metabolism
COG ID : COG0214
EC number : -
Position : 3032196 - 3033185 bp
Length : 990 bp
Strand : -
Note : TIGRFAM: Vitamin B6 biosynthesis protein; HAMAP: Pyridoxal biosynthesis lyase pdxS; KEGG: fra:Francci3_1366 pyridoxal biosynthesis lyase PdxS; PFAM: Vitamin B6 biosynthesis protein

DNA sequence : 
ATGTCCGAGGGTCTGACCGCTGCCGAGCCCGCTTCGCGGGGCCACGGACCGGACCACGGATCCGTGCCCACGGCCACGCT
GCCCGGCGCGGCCGGCGCAGGAGACGGCGCCCACGTGGGCACGGCCCGGGTCAAGCGGGGCATGGCGGAGATGCTCAAGG
GCGGTGTGATCATGGACGTGGTCACGGCCGAGCAGGCCCGGATCGCCGAGGAGGCCGGCGCCGTCGCCGTGATGGCCCTG
GAGCGGGTTCCCGCCGATATCCGTGCCCAGGGCGGAGTCTCCCGGATGAGCGACCCGGAGATGATCGAGTCGATCATCGA
GGCGGTGTCGATCCCGGTGATGGCCAAGGCGCGCATCGGCCACTTCGTCGAGGCCCAGGTGCTCCAGGAGCTGGGGGTCG
ACTACGTCGACGAGTCCGAGGTCCTCACCCCGGCCGACCCGCACCACCACATCGACAAGTGGCGGTTCACCGTCCCGTTC
GTGTGCGGCGCGACCAACCTGGGGGAGGCGCTGCGCCGGATCGGCGAGGGCGCGGCCATGATCCGTTCGAAGGGCGAGGC
GGGCACCGGCGAGGTGTCCAACGCGGTCGTGCACATGCGCACGATCCGGGCGGAGATCGCGCGGCTGTCCGCGCTGCCCG
GCGACGAGCTCTTCGCCGCGGCCAAGGAACTGCGCGCCCCCTACGAACTGGTCGCCGAGGTCGCGCGGCTCGGTGCGCTG
CCGGTCGTGCTGTTCACCGCCGGTGGTATCGCGACGCCCGCGGACGCCGCCCTGATGATGCAGCTGGGGGCGGACGGCGT
GTTCGTCGGCTCGGGCATCTTCAAGTCCGGCGACCCGGCACGGCGCGCCCGGGCGATCGTCGAGGCCACCACCATGTACG
CCCACCCCGACGTCATCGCGAAGGTCTCCCGCGGCCTCGGCGAGGCGATGGTCGGCATCAACGTCAGCGATCTTGCGCCC
GCGGACCGCTTCGCCGACCGCGGATGGTGA

Protein sequence : 
MSEGLTAAEPASRGHGPDHGSVPTATLPGAAGAGDGAHVGTARVKRGMAEMLKGGVIMDVVTAEQARIAEEAGAVAVMAL
ERVPADIRAQGGVSRMSDPEMIESIIEAVSIPVMAKARIGHFVEAQVLQELGVDYVDESEVLTPADPHHHIDKWRFTVPF
VCGATNLGEALRRIGEGAAMIRSKGEAGTGEVSNAVVHMRTIRAEIARLSALPGDELFAAAKELRAPYELVAEVARLGAL
PVVLFTAGGIATPADAALMMQLGADGVFVGSGIFKSGDPARRARAIVEATTMYAHPDVIAKVSRGLGEAMVGINVSDLAP
ADRFADRGW

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
pdxS YP_005137204.1 pyridoxine biosynthesis protein Not tested Not named Protein 4e-106 77
DIP0227 NP_938620.1 pyridoxal biosynthesis lyase PdxS Not tested Not named Protein 3e-106 77
pdxS YP_005141805.1 pyridoxine biosynthesis protein Not tested Not named Protein 4e-106 77