Gene Information

Name : FsymDg_2492 (FsymDg_2492)
Accession : YP_004583782.1
Strain : Frankia sp. 4085684
Genome accession: NC_015656
Putative virulence/resistance : Virulence
Product : XRE family transcriptional regulator
Function : -
COG functional category : K : Transcription
COG ID : COG1476
EC number : -
Position : 2953034 - 2953258 bp
Length : 225 bp
Strand : +
Note : KEGG: fra:Francci3_2281 XRE family transcriptional regulator; PFAM: Helix-turn-helix type 3; SMART: Helix-turn-helix type 3

DNA sequence :
ATGAAGAACCGGCTGCGCGTGCTGCGGGCGGAACGCCGGTGGAGCCAGGCCGACCTGGCCGACCGATGCCGGGTGTCCCG
GCAGACCATCAACGCGATCGAGACCGGACGGTACGACCCCAGCCTTCCCCTGGCATTCACCCTCGCCGACATCTTCGGCC
TGGCCATCGAGGAAATCTTCCTCTTCGACCGGCCAGGAACAGGAACCGGAACCGACCTGCCCTGA

Protein sequence :
MKNRLRVLRAERRWSQADLADRCRVSRQTINAIETGRYDPSLPLAFTLADIFGLAIEEIFLFDRPGTGTGTDLP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SH2314 YP_254229.1 hypothetical protein Not tested ¥ðSh1 Protein 3e-11 54
EF0524 NP_814301.1 Cro/CI family transcriptional regulator Not tested Not named Protein 4e-06 45
ef0042 AAM75247.1 EF0042 Virulence Not named Protein 3e-06 45

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
FsymDg_2492 YP_004583782.1 XRE family transcriptional regulator VFG2175 Protein 1e-06 45
FsymDg_2492 YP_004583782.1 XRE family transcriptional regulator VFG2168 Protein 1e-06 45