Gene Information

Name : FsymDg_2441 (FsymDg_2441)
Accession : YP_004583740.1
Strain : Frankia sp. 4085684
Genome accession: NC_015656
Putative virulence/resistance : Unknown
Product : transketolase
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG0021
EC number : 2.2.1.3
Position : 2895415 - 2897574 bp
Length : 2160 bp
Strand : -
Note : TIGRFAM: Transketolase, bacterial-like; KEGG: afw:Anae109_2025 transketolase; PFAM: Transketolase, N-terminal; Transketolase-like, pyrimidine-binding domain; Transketolase, C-terminal

DNA sequence :
GTGTGGACCCGCAAGCGCCTGCGACGGACGTTGTGGGCGTCCTATGTCGACAAAGGGATGTACATGACGCCCACCGAGCA
GCCGACCATCACCGACACGGACGATCTGTGCGTCGCGACGATCCGCACCCTGTGTATGGACGCGGTGCAGGCCGCGGCCT
CCGGGCACCCGGGTACCCCGATGGCCATGGCACCGGTGATCTACACGCTGTGGCAGGAGTTCCTGCGCTTCGACCCCGAC
GATCCCGCCTGGCCGAACCGGGACCGGTTCGTGCTGTCGGCGGGGCACGCGTCGACGTTGCTGTACGCGACGCTGCACCT
GGCCGGCGTCCGGGCGGTCGACCCCACCTACGAGACCCTCGGGGGGCCAGCGGTCACCCTCGACGACATCAGACGGTTCC
GCCAGCTGGACGGGAGGTGCCCCGGCCACCCGGAGTACCGCTGGACGTCGGGGGTGGAGGCGACCACCGGACCGCTGGGC
ACGGGCGCGGCGACGGCGGTGGGCATGGCCATCGCCGGACGCTGGCTGGCGGCGCGGTTCAACCGGCCCGGCTTCGACGT
GTTCGACCACGACGTGTACGCGCTGTGCGGCGACGGCGACCTGATGGAGGGGGTCGCGGCCGAGGCGGCGTCGCTGGCCG
GCCACCTGCGGCTGGCCAACCTGTGCTGGATCTACGACAACAACCACATCAGTATCGAGGGCGGCACCGACCTGGCGTTC
ACCGAGGACGTGGCCACCCGGTTCATCGCCTACGGCTGGAACGTCACCCGGGTCGGCGACGCCAACGACCGCACGGCCCT
GGGCCGCGCCTTCGAGACGTTCCGCCGTGAACCGCACCGCCCGACCCTGGTCATCGTCGACAGCCAGATCGCCTTCGGCG
CCCCGACCAAGCAGGGCACCGCCGCCGCGCACGGGGAGCCGCTGGGGGAGGAGGAGATCCGGGCGACGAAGCGGTTCTAC
AACTGGCCGCCGGACGCGCACTTCCTTGTCCCCGACGGGGTGTACGAGCACTTCGCCGCCGGTGTCGGGAAGCGGGGCCG
GGCCGAGCGGGACAGCTGGCTGGCCCTGCTCGACCGCTACCGGGAGGCATATCCCGATCTTGCCGGCCAGCTCGACCTGA
TCTGGCGTGGGCAGCTGCCCGACGGCTGGGACGCCAACATCCCCGTCTTCCCCGCCGACGGCAGGGGCCTGGCCACCCGG
GACTCCTCCGGGAAGGTCCTCAACGCCGTCGCCGCCCGGGTGCCCTGGCTGGTCGGCGGCTCCGCCGATCTTGCCCCGTC
GACGAAGACCCGGCTGACCGTCGACGGCGCTGGGGACTTCCAGGCCGCCAGCCCGGGCGGGCGCAACCTGCACCTTGGCG
TCCGCGAGCACGCGTCGGCCGCGGTGGCCAACGGGCTGTCCCTGTCCGGGCTGCGGCCGCTGTGGTCGACCTTTCTGATC
TTCTCCGACTTTGCCCGCGGTGCCCTGCGGCTGTCCGCGCTGATGGAGCTGCCGGTCATCCACGTGTTCACCCATGACTC
CATCGGGGTCGGGGAGGACGGGCCGACGCACCAGCCGATCGAGCAGCTCGCCTCGCTGCGGGCCGTCCCCGGCCTGCTGG
TGATCCGTCCCTGTGACGCGGGCGAGGTCGTGCAGGCGTGGCGGGTGGTCATGGGCCTGCGGCAGGAGCCGGCCGCGCTC
GTCCTGAGCCGGCAGGCGCTGCCGACGCTGGACCGGGCCCGCTACGCCGACGCCGCCGGGCTCGCCCGCGGCGGCTACGT
GCTGGTCGACCCCGCCGACGGCGATCCCGAGGTGATCCTGATCGGTACCGGCAGCGAGGTGCACCTGGCCCTGGCCGCCC
ACGAGGAGCTGACCGCGCAGGGGGTGCGCGCCCGGGTGGTCAGCCTGCCGTCCTGGGAGCTGTTCGAGCGGCAGCCCGCG
CAGTACCGCGACCAGGTGCTCCCACCGGCGGTCCGCGCGCGGGTCGTGGTCGAGCAGGCGGCCACGCTCGGCTGGGAACG
GTACGCCGGCCCGGACGGGGTGATCATCGGTATGCGGACCTTCGGCGCGTCCGCCCCGCTGCGGGCGTTGCAGACCAAGT
TCGGTTTCACCCCGCAGGCGGTGGTCAGTGCCGCCAGGCAGAGCCTGGCCGCCGTCAGCGCTGTTGGTGACCCGGCGTAG

Protein sequence :
MWTRKRLRRTLWASYVDKGMYMTPTEQPTITDTDDLCVATIRTLCMDAVQAAASGHPGTPMAMAPVIYTLWQEFLRFDPD
DPAWPNRDRFVLSAGHASTLLYATLHLAGVRAVDPTYETLGGPAVTLDDIRRFRQLDGRCPGHPEYRWTSGVEATTGPLG
TGAATAVGMAIAGRWLAARFNRPGFDVFDHDVYALCGDGDLMEGVAAEAASLAGHLRLANLCWIYDNNHISIEGGTDLAF
TEDVATRFIAYGWNVTRVGDANDRTALGRAFETFRREPHRPTLVIVDSQIAFGAPTKQGTAAAHGEPLGEEEIRATKRFY
NWPPDAHFLVPDGVYEHFAAGVGKRGRAERDSWLALLDRYREAYPDLAGQLDLIWRGQLPDGWDANIPVFPADGRGLATR
DSSGKVLNAVAARVPWLVGGSADLAPSTKTRLTVDGAGDFQAASPGGRNLHLGVREHASAAVANGLSLSGLRPLWSTFLI
FSDFARGALRLSALMELPVIHVFTHDSIGVGEDGPTHQPIEQLASLRAVPGLLVIRPCDAGEVVQAWRVVMGLRQEPAAL
VLSRQALPTLDRARYADAAGLARGGYVLVDPADGDPEVILIGTGSEVHLALAAHEELTAQGVRARVVSLPSWELFERQPA
QYRDQVLPPAVRARVVVEQAATLGWERYAGPDGVIIGMRTFGASAPLRALQTKFGFTPQAVVSAARQSLAAVSAVGDPA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
APECO1_2641 YP_859417.1 transketolase Not tested Not named Protein 3e-115 46
tktA AAO17218.1 TktA Not tested tcd island Protein 7e-119 46