Gene Information

Name : FsymDg_2245 (FsymDg_2245)
Accession : YP_004583567.1
Strain : Frankia sp. 4085684
Genome accession: NC_015656
Putative virulence/resistance : Resistance
Product : Cys/Met metabolism pyridoxal-phosphate-dependent protein
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG0626
EC number : -
Position : 2680063 - 2681247 bp
Length : 1185 bp
Strand : +
Note : PFAM: Cys/Met metabolism, pyridoxal phosphate-dependent enzyme; KEGG: gmc:GY4MC1_0190 Cys/Met metabolism pyridoxal-phosphate-dependent protein

DNA sequence : 
ATGCCGGACGCCCACACGACCAGCAGGACCAGCAGGACGGTCAACCACGCCGATCGTGAGCTGCGCCATGACCGCTCCGT
GGCACCGCCCATCTACCAGACGGCGACCTTCTGGGCCGACGACGCCGAGACGTTCGCCCAGGCGGCGGTCGAACGGCGCG
GCCAGGGCTTCTACACCCGTTTCGGCAACCCCAACCACGCGCAGGTCGCGGCCATCGTCGCGGAGCTGGAGCATGCCGAA
ACCGCGCTCGTCAGCGCCTCGGGCATGGCGGCGCTCACCACAGCCGTGCTGGCCCTGGCCTCCGCTGGCGATCACGTGAT
CGGGCAGAGATCCACCTACAGCGGCACGGCGTCCCTGTTGCTGAACCTCCTGCCGCGCCTGGGCGTGACGACCACACAGG
TGGACCAGACGGACCCTGACGCCTTCGCCCGAGCCCTGACCCCGCGGACCCGCCTCATTCTGGTCGAATCGCCGAGCAAC
CCACTGCTGCAGATCACCGACCTACGCGCCGTCGCGGATCTCGCCCACGCACACAACGCGCTGATCCTGGCGGACAACAC
CTTCGCCACACCCGTGAACCAGCGACCGCTGGAGCTCGGTGTCGACCTGGTGTGGCACAGCGCGACCAAATACCTCAACG
GCCACTCCGACGTGTCAGCCGGCGTGCTCGCGGGGCCGGTGGAGCTCCTGGACCGCGTCTGGGATGTCGCTCTGCTCACC
GGCGCGACGCTCGGCCCCATCGACGCCTGGCTGCTGCTGCGCGGTCTGCGCACACTGCCGCTGCGCGTCGCCAGGCACAA
CGCCAACGGCCAGGCCCTCGCCGAGGCGCTGGAGCGGCACCCCGCCGTCGCACGGGTGCACTACCCGGGCCTGGCGGCAC
ATCCGCAGCACGCGCTCGCGGCCCGTCAGATGAGTGGCTTCGGCGGGGTGCTCGCGGTCGAGTTCGCCGGCGGCCACGAG
GCGGCCGACGCCTTCCTCGACCGGCTGCGTCACGTCCGACGAGCGGTCAGTCTCGGTGGTGTGGAGTCCCTCGCCGTGCG
CCCCGCGGCGATGTGGGCGGGGATGCTCAGCGAGGAGCAGATCGTCGCCTCGGGGGTTCCGCTGGGGCTGGTCCGGCTCG
CCGCCGGCACCGAGGACACCGCCGACCTCGTCGACGACGTGCTCACGGCAGCCGATTCCCTGTAG

Protein sequence : 
MPDAHTTSRTSRTVNHADRELRHDRSVAPPIYQTATFWADDAETFAQAAVERRGQGFYTRFGNPNHAQVAAIVAELEHAE
TALVSASGMAALTTAVLALASAGDHVIGQRSTYSGTASLLLNLLPRLGVTTTQVDQTDPDAFARALTPRTRLILVESPSN
PLLQITDLRAVADLAHAHNALILADNTFATPVNQRPLELGVDLVWHSATKYLNGHSDVSAGVLAGPVELLDRVWDVALLT
GATLGPIDAWLLLRGLRTLPLRVARHNANGQALAEALERHPAVARVHYPGLAAHPQHALAARQMSGFGGVLAVEFAGGHE
AADAFLDRLRHVRRAVSLGGVESLAVRPAAMWAGMLSEEQIVASGVPLGLVRLAAGTEDTADLVDDVLTAADSL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
metB YP_281510.1 cystathionine beta-lyase Not tested Not named Protein 2e-38 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
FsymDg_2245 YP_004583567.1 Cys/Met metabolism pyridoxal-phosphate-dependent protein BAC0207 Protein 5e-49 45