Gene Information

Name : FsymDg_2162 (FsymDg_2162)
Accession : YP_004583493.1
Strain : Frankia sp. 4085684
Genome accession: NC_015656
Putative virulence/resistance : Unknown
Product : porphobilinogen deaminase
Function : -
COG functional category : H : Coenzyme transport and metabolism
COG ID : COG0181
EC number : -
Position : 2582664 - 2583605 bp
Length : 942 bp
Strand : -
Note : TIGRFAM: Tetrapyrrole biosynthesis, hydroxymethylbilane synthase; HAMAP: Porphobilinogen deaminase; KEGG: sma:SAV_1038 porphobilinogen deaminase; PFAM: Tetrapyrrole biosynthesis, hydroxymethylbilane synthase

DNA sequence : 
GTGGCCATGTCCGCATCCCGGCTGATCCGCATTGGTACCCGTTCCTCCCCGATGGCTCTTGCCCAGGCCGAGCGGGTCCG
CGCGGAGCTGACAGCCCTCAACCCCGATCTCACCGCCGAGATCGTGCCCATCACCACCAGTGGGGACAGGTGGACCGGTC
CGCTGTCCACGCTCGGTGGCAAGGGTGCCTTCACCAAGGAGGTCGACGAGGCACTGCTCGCCGGCCGTGCCGATCTCGCC
GTGCACTGTATGAAGGACGTCCCCGGCGACCGCCCGGTCCCGGCCGGCACCGTCTTCGCCGCCTACCTGCCCCGGGACGA
CATCCGCGACGCCCTGATCCACCCCGGCGGCCGCACGCTCGACCAGCTGCCCGCCGGCACCCGGGTCGGTACCTCCGCCG
TGCGCCGGATCGCCCAGCTCGCCCAGTCCCACCCGCATCTGGAGACCGTGCCGATCCGCGGCAACGCCAACACCCGGCTG
GCCAGGCTGGACGACGGCGCGGCCGACGCGCTGCTGCTGGCCGTCTCCGGCCTGGAGCGCATCGGCCAGGCGGGCCGGAT
CACCGAGATCCTCTCGGCGGAGACGATGTGCCCGCCGATCGGCGCCGGCGTGCTCGGCCTGCAGTGCCGCGAGGACGACA
CCGACACCGCCCAGCTCGTCGCCGGCATGGACGACATCGACGCCCGGCGGCAGGTCACCGCCGAGCGCATGCTCCTGCAC
GTCCTGCAGGGCCACTGCAACTCGCCGATCGCCGGGCACGCCCACACCGAGCCCGACGGGCGGCTGTCCCTGCGGGCGAA
GGTGTTCAGCCCCGACGGCAAGACCGTCCTGGACGCCCACGAGTGGGGCCCCGGCACGGACCCGACCACGCTGGGGGCGT
CGGTCGCGGTGGCGCTGCTCCGCCAGGGCGCCCAGGACCTCCTGAACGCCATCCCGCACTGA

Protein sequence : 
MAMSASRLIRIGTRSSPMALAQAERVRAELTALNPDLTAEIVPITTSGDRWTGPLSTLGGKGAFTKEVDEALLAGRADLA
VHCMKDVPGDRPVPAGTVFAAYLPRDDIRDALIHPGGRTLDQLPAGTRVGTSAVRRIAQLAQSHPHLETVPIRGNANTRL
ARLDDGAADALLLAVSGLERIGQAGRITEILSAETMCPPIGAGVLGLQCREDDTDTAQLVAGMDDIDARRQVTAERMLLH
VLQGHCNSPIAGHAHTEPDGRLSLRAKVFSPDGKTVLDAHEWGPGTDPTTLGASVAVALLRQGAQDLLNAIPH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00327 YP_008207792.1 Porphobilinogen deaminase Not tested AbaR25 Protein 5e-42 45
BJAB0868_00331 YP_008211657.1 Porphobilinogen deaminase Not tested AbaR26 Protein 5e-42 45