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Name : FsymDg_2100 (FsymDg_2100) Accession : YP_004583440.1 Strain : Frankia sp. 4085684 Genome accession: NC_015656 Putative virulence/resistance : Virulence Product : RNA-directed DNA polymerase Function : - COG functional category : L : Replication, recombination and repair COG ID : COG3344 EC number : - Position : 2495512 - 2496789 bp Length : 1278 bp Strand : + Note : PFAM: RNA-directed DNA polymerase (reverse transcriptase); Group II intron, maturase-specific; KEGG: ara:Arad_9023 reverse transcriptase/maturase protein DNA sequence : GTGGGCGAGACAAGACCAGCGGGCAAGTCGTTTGACATTCCGAAGACGCTGATATGGGAAGCATACCTGAAGGTCAACGG CAACAAGGGAGCGGCAGGGGTCGACGGGCAATCTCTAGCGGAATTTGAACAGGATCTTCGGAACAACTTGTTCAAGCTCT GGAACAGGATGTCGTCGGGGAGCTATTTCCCGGAGCCAGTGAAAGCCGTCTCCATCCCGAAGCCAGATGGTGGCACACGG ATCCTCGGAGTGCCCACTATCGCCGACCGGATAGCACAGACAGCCGTGGCCATGATCCTGGAGCCGGACGTGGATCCAGT GTTCCACGCCGATTCCTACGGTTATCGTCCAGGAAAGTCTGCGCTGGACGCGGTGGAGGTGTGCAAGCAGCGGTGCTGGC GGCACCCCTGGGTGGTCGATCTCGATATCCAAGGGTTCTTCGACAACGTTCCGCACGCGCAGATCATCGCCGCAGTGGAG AAGCACGCGAATCTGACATGGGTTGTGCTGTACGTGAAACGGTGGCTCGTCGCGCCGGTTCAGCATCCGGACGGCAGCCG TGTCACTCCCATCAAGGGAACTCCACAGGGCTCGGCGATTTCACCGTTGTTGTCGAATCTCTTCCTGCACTACGCTTTGG ACTACTGGCTTGCCAGGAGATTTCCAGTGGTGCGGTTCGAGAGGTACTGCGACGACATCATCCTACACTGTTACAGTCAG CGGCAGGCGAAGTACATTCGCGACGTCGTTGAGAAACGGTTGCTGGAGTTCTGGTTGCGCTGTCACCCGGACAAGACTCG GATCGTCTACTGCAAGCAGGACGGACGCGACGAAGAGCACCCGGTAACGAGCTTCACGTTCCTGGGTTTCGACTTTCATC GTGCGCCCATCCGGCGACGTGATGGCGTGCTGATGTGCGGGTTCGTCCCGTTGGTCGGCAGGGCGGCGCTGAAGTCGATG GCACGGGTCATCCGGCAATGGAAGCTGGGTCGCAGGACCAGTCTGGGTTTTCGGGGACTCGCCGCGATGGTCAATCCCAT CGTGGCGGGGTGGATCGGCTACTACGGGCGCTTCTACAAGTCCAGGCTGATGCACTTCCTAAGTCAGCGGATCAACCCTT TCCTCGTGAAGTGGGCGATGCGGAAATACAAACGATTGCGCCGCGCCAAAGGGAGAGCTCGTCGGAAATTGGCCGAGATA GCGTCGGCGTTCCCGGCGATGTTTGCTCACTGGAAGCATGGCGCGATGCCTACTGGTTCGACGGTGGGAGCCCGGTGA Protein sequence : MGETRPAGKSFDIPKTLIWEAYLKVNGNKGAAGVDGQSLAEFEQDLRNNLFKLWNRMSSGSYFPEPVKAVSIPKPDGGTR ILGVPTIADRIAQTAVAMILEPDVDPVFHADSYGYRPGKSALDAVEVCKQRCWRHPWVVDLDIQGFFDNVPHAQIIAAVE KHANLTWVVLYVKRWLVAPVQHPDGSRVTPIKGTPQGSAISPLLSNLFLHYALDYWLARRFPVVRFERYCDDIILHCYSQ RQAKYIRDVVEKRLLEFWLRCHPDKTRIVYCKQDGRDEEHPVTSFTFLGFDFHRAPIRRRDGVLMCGFVPLVGRAALKSM ARVIRQWKLGRRTSLGFRGLAAMVNPIVAGWIGYYGRFYKSRLMHFLSQRINPFLVKWAMRKYKRLRRAKGRARRKLAEI ASAFPAMFAHWKHGAMPTGSTVGAR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | ABR13526.1 | reverse transcriptase | Not tested | PAGI-7 | Protein | 2e-96 | 47 |
| unnamed | CAD33771.1 | putative reverse transcriptase | Not tested | PAI I 536 | Protein | 2e-80 | 44 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| FsymDg_2100 | YP_004583440.1 | RNA-directed DNA polymerase | VFG1512 | Protein | 1e-80 | 44 |
