Name : FsymDg_1985 (FsymDg_1985) Accession : YP_004583333.1 Strain : Frankia sp. 4085684 Genome accession: NC_015656 Putative virulence/resistance : Unknown Product : integrase catalytic subunit Function : - COG functional category : L : Replication, recombination and repair COG ID : COG2801 EC number : - Position : 2363660 - 2364550 bp Length : 891 bp Strand : - Note : PFAM: Integrase, catalytic core; KEGG: fre:Franean1_3089 integrase catalytic region DNA sequence : GTGATCGATAAGTTCGAGCTGATCGCCGCGGAGAAGGACAACTACCCGATACGCAAAATGTGCCAGTGGCTCGTGGTGTC GACGTCCGGTTTCTACGACTGGTACCAGCGACCGGTGTCGTCCCGGACCCGCCGGCACACCACCCTGGACACCCAGGTGC GGGCGTTGTTCGCCGCCTCGCGCCAGACCTACGGCGCGCGGCGGATCGCCGCCGCTCTGACCGCGTCGGGCCAGCCCACC TCGGTCCGCCTCGCCCGACGGATCATGCGCCGAGCAGGGCTGAAGGCCTGCCAGCCCAGGGCCTACCGCCGCACCACGAT CCCCGGCCAGGCGCCGGTGCCCACCGACCACGTCCGCCGCGACTTCACCGCCACCCGCCCCGGGGCCAAGCTCGTCGGTG ACATCACCTATGTCCGTACCGGCGAAGGCTGGCTGTATCTCGCCACGGTCATCGACTGCTATTCACGGAAGGTTCTCGGC TGGTCGATGGCCAGTCACATGCGGACCGAACTCGTCGTCGACGCATTCACCATGGCCGCGTCCCGCACCACCCTTGCACC GAACGCGGTTTTTCACTCGGATCGCGGTACGCAATACACGTCCGACGCCTACCATCGCACGCTGGCACGACACGGCGTGC GACCTTCCGTAGGCGCCACCGGAGTGTGCTGGGACAACTCCGCCGCCGAATCCTTCTTTGGCACCCTGAAAAACGAACTC GTCTATCGGGAAATTTACCTAACCCGTCGTGCCGCCCGCAGTGCGATCGCCGAGTACATCGAAGTCTTCTACAACCGGCA GCGACTCCACTCCACCCTCGGCTACCACACCCCGGAACACGTCGAACGTCTCTACCTGACGAGTCGGACATCAATACCAG AGGCGGCGTAA Protein sequence : MIDKFELIAAEKDNYPIRKMCQWLVVSTSGFYDWYQRPVSSRTRRHTTLDTQVRALFAASRQTYGARRIAAALTASGQPT SVRLARRIMRRAGLKACQPRAYRRTTIPGQAPVPTDHVRRDFTATRPGAKLVGDITYVRTGEGWLYLATVIDCYSRKVLG WSMASHMRTELVVDAFTMAASRTTLAPNAVFHSDRGTQYTSDAYHRTLARHGVRPSVGATGVCWDNSAAESFFGTLKNEL VYREIYLTRRAARSAIAEYIEVFYNRQRLHSTLGYHTPEHVERLYLTSRTSIPEAA |
Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
unnamed | AAL57581.1 | transposase 1 | Not tested | LEE | Protein | 1e-43 | 42 |
unnamed | AAL57519.1 | transposase 1 | Not tested | LEE | Protein | 1e-43 | 41 |
ECO111_3732 | YP_003236068.1 | putative IS3 transposase InsF | Not tested | LEE | Protein | 4e-43 | 41 |