Gene Information

Name : FsymDg_1874 (FsymDg_1874)
Accession : YP_004583234.1
Strain : Frankia sp. 4085684
Genome accession: NC_015656
Putative virulence/resistance : Virulence
Product : iron-chelate-transporting ATPase
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1120
EC number : 3.6.3.34
Position : 2218861 - 2219688 bp
Length : 828 bp
Strand : +
Note : PFAM: ABC transporter-like; KEGG: fra:Francci3_4240 ABC transporter-like protein; SMART: ATPase, AAA+ type, core

DNA sequence : 
GTGACACGACTGCGTCTGGACGGCGTGGGCGTGCGGATCGACCAGGCGCTGATCGTCCACGACGTCACCGTCGACTGCGC
GCCCGGCGCCTTCGTCGGCCTGGTCGGCCCGAACGGCAGCGGGAAGTCCACCGTGCTGAAGACCGTCTACCGGGCGGTTG
CGCCGACATCCGGGGCTGTTCTTCTCGACGAGCGGAACATGCTGCGGGAGCTCACGTCGCGGCAGTCCGCGCGGCAGGTG
GCGGCGCTGGCCCAGGAGCACTCCCAGAATTTCGACTTCACCGTCGCCGAGATCGTCGCGGCCGGGCGGACGCCGCACAA
GAACCGGTGGGAGTTCACGTCCGCGGCCGACCGTCGCATCGTCGCCGACGCGCTCGACACGGTCGGTATGCCCGCGTATG
CCGACCGGGCGTTCACCTCCCTGTCCGGCGGGGAGAAGCAGCGGGTGCTGCTCGCCCGGGCGCTGGTGCAGGAGCCGTCG
GTGCTCGTCCTGGACGAGCCGACCAACCATCTCGACATCGCCACCCAGCTCAGCCTGCTCGCGCTGGTGCGTTCGCTGGG
GATCACCGTGTTGGCCGCGCTGCACGACCTCAACCTCGCGGCGGCGTTCTGCGACCGGCTCTACGTGCTGCGCGACGGTG
TCGTCGTCCGCACGGGGGATCCCTGGGAGGTGCTGACCCCGGATCTCGTCGCCGAGGTTTTCGGGGTGCGGGCCCATCGC
AGTGTCCATCCGGTGACCGGACGCCTCCATCTTGCTTTTTCCGAGATCCTCGACAGGGACGAGAAGGCGCCGCAGGAACG
CGAACTCGCCACGGAAGGAAACATATGA

Protein sequence : 
MTRLRLDGVGVRIDQALIVHDVTVDCAPGAFVGLVGPNGSGKSTVLKTVYRAVAPTSGAVLLDERNMLRELTSRQSARQV
AALAQEHSQNFDFTVAEIVAAGRTPHKNRWEFTSAADRRIVADALDTVGMPAYADRAFTSLSGGEKQRVLLARALVQEPS
VLVLDEPTNHLDIATQLSLLALVRSLGITVLAALHDLNLAAAFCDRLYVLRDGVVVRTGDPWEVLTPDLVAEVFGVRAHR
SVHPVTGRLHLAFSEILDRDEKAPQERELATEGNI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
CDCE8392_1767 YP_005134301.1 iron complex transport system ATP-binding protein Virulence Not named Protein 2e-40 44
fagC YP_005680307.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 7e-33 42
fagC YP_003782430.1 ABC transporter ATP-binding protein Not tested PiCp 1 Protein 7e-33 42
fagC YP_005682397.1 ATP binding cytoplasmic membrane protein Virulence PiCp 1 Protein 7e-33 42
fagC YP_005684488.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 7e-33 42
fecE AAL08451.1 ATP-binding protein FecE Virulence SRL Protein 2e-29 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
FsymDg_1874 YP_004583234.1 iron-chelate-transporting ATPase BAC0164 Protein 9e-30 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
FsymDg_1874 YP_004583234.1 iron-chelate-transporting ATPase VFG1042 Protein 9e-30 41