Gene Information

Name : FsymDg_1663 (FsymDg_1663)
Accession : YP_004583037.1
Strain : Frankia sp. 4085684
Genome accession: NC_015656
Putative virulence/resistance : Unknown
Product : transposase IS3/IS911 family protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1956234 - 1956611 bp
Length : 378 bp
Strand : +
Note : PFAM: Transposase IS3/IS911; KEGG: srt:Srot_2378 transposase IS3/IS911 family protein

DNA sequence :
GTGCCCGCTCCCAGGAAGTATCCCGATGAGCTCCGTGAACGTTCCGTCCGGCTCGTGCTGCAGATGCGTCGTGAGCAGCC
GGCGGAGGCGTCGCGTGCGATCTCGACGGTCGCGAAGCCGCTGGATGTGCATCCGGCGACGCTGCGGCTGTGGGTGAATC
AGGCTGAGGTCGACCAGGGTACTCGTCCGGGAACCACCACACCGGATGCCGCGCGTATCGCCGAGCTGGAACGTGAAGTT
CGTGAGCTGAAGCGCGCGAACGAGATCCTGAAAGCGGCGTCGGCTTTCTTTGCGCGGGAGCTGTGCGCCACGAGGCGCCG
AGACAATCGAGGAGGGGTGAGAGACCTTTCCCGCTGGGCTGTCGCAGCAGCCCGGTGA

Protein sequence :
MPAPRKYPDELRERSVRLVLQMRREQPAEASRAISTVAKPLDVHPATLRLWVNQAEVDQGTRPGTTTPDAARIAELEREV
RELKRANEILKAASAFFARELCATRRRDNRGGVRDLSRWAVAAAR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
CDCE8392_1959 YP_005134490.1 hypothetical protein Not tested Not named Protein 9e-12 45
CDC7B_2036 YP_005163477.1 hypothetical protein Not tested Not named Protein 8e-11 44
APECO1_3498 YP_854313.1 transposase; OrfA protein of insertion sequence IS629 Not tested PAI I APEC-O1 Protein 1e-09 44
ORF_36 AAZ04445.1 conserved hypothetical protein Not tested PAI I APEC-O1 Protein 8e-10 44
Z1199 NP_286734.1 hypothetical protein Not tested TAI Protein 1e-13 43
Z1222 NP_286757.1 hypothetical protein Not tested TAI Protein 1e-13 43
Z1639 NP_287142.1 hypothetical protein Not tested TAI Protein 1e-13 43
Z1661 NP_287163.1 hypothetical protein Not tested TAI Protein 1e-13 43
unnamed CAD42084.1 hypothetical protein Not tested PAI II 536 Protein 1e-10 42
IS629 CAI43820.1 hypothetical protein Not tested LEE Protein 6e-14 41
SF2979 NP_708753.1 IS629 ORF1 Not tested SHI-1 Protein 2e-11 41
IS629 CAI43841.1 hypothetical protein Not tested LEE Protein 6e-14 41
unnamed AAF09023.1 unknown Not tested SHI-O Protein 2e-11 41
IS629 CAI43908.1 hypothetical protein 1 Not tested LEE Protein 6e-14 41
tnpE AAD44738.1 TnpE Not tested SHI-2 Protein 2e-11 41
c3596 NP_755471.1 hypothetical protein Not tested PAI I CFT073 Protein 3e-11 41
r13 AAC61722.1 R13 Not tested PAI I CFT073 Protein 2e-11 41
c5177 NP_757025.1 hypothetical protein Not tested PAI II CFT073 Protein 3e-11 41
unnamed AAL67404.1 R13-like protein Not tested PAI II CFT073 Protein 2e-11 41
ECUMN_3344 YP_002414020.1 transposase ORF A, IS629 Not tested Not named Protein 3e-11 41
unnamed AAL67399.1 TnpE-like protein Not tested PAI II CFT073 Protein 1e-11 41
c5168 NP_757016.1 hypothetical protein Not tested PAI II CFT073 Protein 2e-11 41
unnamed ADD91740.1 hypothetical protein Not tested PAI-I AL862 Protein 1e-11 41
ECO103_3584 YP_003223442.1 IS629 transposase OrfA Not tested LEE Protein 9e-14 41
c5214 NP_757062.1 hypothetical protein Not tested PAI II CFT073 Protein 2e-11 41
IS629 CAC37925.1 hypothetical protein Not tested LEE Protein 6e-14 41
S3184 NP_838467.1 IS629 orfA Not tested SHI-1 Protein 2e-11 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
FsymDg_1663 YP_004583037.1 transposase IS3/IS911 family protein VFG1603 Protein 5e-11 42
FsymDg_1663 YP_004583037.1 transposase IS3/IS911 family protein VFG0643 Protein 4e-12 41
FsymDg_1663 YP_004583037.1 transposase IS3/IS911 family protein VFG1717 Protein 8e-12 41