Gene Information

Name : FsymDg_0125 (FsymDg_0125)
Accession : YP_004581627.1
Strain : Frankia sp. 4085684
Genome accession: NC_015656
Putative virulence/resistance : Unknown
Product : transposase mutator type
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG3328
EC number : -
Position : 159728 - 161017 bp
Length : 1290 bp
Strand : +
Note : PFAM: Transposase, mutator type; KEGG: scb:SCAB_0381 transposase

DNA sequence :
ATGACCGACACGATCGAGGACACACCGGCCGATACCGGCCCCGCACCGGCCCCGCCGGTGATGGTTGACGAGGCGCTCGC
CGAGAGCCTCATCGAGCGGGCCCGCGTCGAGGGGCTGTCGCTGACCGGGCCCGGTGGGATGCTCGCCGGGCTGACGAAGA
TGGTCCTGGAGAAGGCCCTGGCCGCCGAGATGACGGCGCATCTCGGTTACGAGCCGGGTGACCCGGCCGGCCGCAACGGC
GGGAACTCCCGTAACGGCACCCGGACCAAGACCGTGGTCACCGAGATCGGCCCGGTCGCGGTCGATGTGCCCCGTGACCG
CGACGGTTCGTTCACCCCGCAGCTCGTCGCGAAGCGGCAGCGTCGCCTCGGCGGGGTCGAGGAACTCGTCGTCTCGCTGG
TCGCCAAGGGGCTGACCACCGGCGAGGTCCAGGCGCATCTGGCCGAGGTCTACGGCACCGAGGTGTCCCGGCAGACCATC
TCCACCATCACCGACAGTGTGATCGCCGGCATGGAAGAGTGGCGTAACCGGCCGCTCGACCCGGTCTACGCCGTCGTGTT
CATCGACGCGATCGTGGTGAAGATCCGTGACGGGCAGGTCGCGAACCGGCCGGTCTACGTCGCGATCGGGGTCACCGCCG
ACGGCGAACGCGACGTGCTCGGACTGTGGGCCGGCACCGGCGGTGAAGGCGCCAAGCACTGGCAGCAGGTCCTCACCGAG
CTGAAGAACCGCGGCGTCACCGACGTGCTCATCCTCGTCTGCGACGGGCTGACCGGTCTGCCCGACGCCGTCGCCCAGGT
CTGGCCCGTCACCATCGTCCAGACCTGCATCGTGCACCTTCTGCGCAATTCGTTCCGGTATGCCAGCAAGAAGGACTGGC
CCGCGCTCGCGAAGGACCTCAAGCCCGTCTACACCGCCCCGACCGAGGCGGCCGCCCTCGACCGATTCACCGACTTCGCC
GCGACCTGGGAGAAGAAGTACCCCGCGATCATCCGGCTCTGGGAGAACGCCTGGGCCGAGTTCGTCCCGTTCCTCCGGTT
CGACGCCGAGATCCGGACCGTGATCTGCACGACCAACGCGATCGAGAGCCTCAACGCCCGGTTCCGCCGCTCGGTGAAGG
CCCGCGGCCACTTCCCGAACGAACAGGCCGCGCTCAAACACCTCTACCTCACCCTGACCAGCCTCGACCCCACCGGCCGC
GGCCGAGCCAAATGGATGATCCGCTGGAAAGCACCCCTCAACGCGTTCGATCTGGCCTTCGACGGACGCCTGTCCGCCGG
CCGGAAGTAG

Protein sequence :
MTDTIEDTPADTGPAPAPPVMVDEALAESLIERARVEGLSLTGPGGMLAGLTKMVLEKALAAEMTAHLGYEPGDPAGRNG
GNSRNGTRTKTVVTEIGPVAVDVPRDRDGSFTPQLVAKRQRRLGGVEELVVSLVAKGLTTGEVQAHLAEVYGTEVSRQTI
STITDSVIAGMEEWRNRPLDPVYAVVFIDAIVVKIRDGQVANRPVYVAIGVTADGERDVLGLWAGTGGEGAKHWQQVLTE
LKNRGVTDVLILVCDGLTGLPDAVAQVWPVTIVQTCIVHLLRNSFRYASKKDWPALAKDLKPVYTAPTEAAALDRFTDFA
ATWEKKYPAIIRLWENAWAEFVPFLRFDAEIRTVICTTNAIESLNARFRRSVKARGHFPNEQAALKHLYLTLTSLDPTGR
GRAKWMIRWKAPLNAFDLAFDGRLSAGRK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
api41 CAF28515.1 is285 transposase Not tested YAPI Protein 4e-71 42
tnp7109-23 YP_001800851.1 transposase for insertion sequence Not tested Not named Protein 1e-70 41