Gene Information

Name : FsymDg_1246 (FsymDg_1246)
Accession : YP_004582657.1
Strain : Frankia sp. 4085684
Genome accession: NC_015656
Putative virulence/resistance : Unknown
Product : ribonuclease PH
Function : -
COG functional category : J : Translation, ribosomal structure and biogenesis
COG ID : COG0689
EC number : 2.7.7.56
Position : 1468728 - 1469474 bp
Length : 747 bp
Strand : +
Note : KEGG: fri:FraEuI1c_5805 ribonuclease PH; manually curated; TIGRFAM: Ribonuclease phosphorolytic, bacterial-type; PFAM: Exoribonuclease, phosphorolytic domain 1; Exoribonuclease, phosphorolytic domain 2; HAMAP: Ribonuclease phosphorolytic, bacterial-type

DNA sequence :
GTGAGACGTTCCGACGGCAGGACATCCGGGGAACTCCGCCCGGTGAACATCACCCGTGGCTGGCAGGACCACGCCGAGGG
CTCGGCGCTGATCGAGTTCGGGCGGACGCGGGTGCTGTGCGCGGCATCGGTCACCGAAGGCGTCCCGCGCTGGCGCAAGG
GCAGCGGGCTGGGCTGGGTGACCGCGGAGTACTCGATGCTGCCGCGGGCGACGAACACCCGCAACGACCGCGAGTCCGTG
CGCGGGCGCATCGGTGGCCGCACGCACGAGATCTCCCGGCTCATCGGCCGCAGCCTGCGTACCTGCATCGATCTGAAGAT
CCTGGGCGAGAACACGATCGCGATCGACTGTGACGTCCTGGTGGCCGACGGCGGCACCCGTACCGCGTCGATCACCGGCG
CGTATGTCGCGCTGTCGGACGCGTGCGGCTGGCTCGGCCGTCCGGACGCCCTGATCCGCAGCGTGGCGGCGGTCAGCGTC
GGGGTCGTCGCCGGCCGGCCGCTGCTGGACCTCGCCTACGACGAGGACTCCGGCGCCGACACCGACATGAACGTGATCTG
CACCGGTGACGGCGGCTTCGTCGAGGTGCAGGGGACGGCCGAGGGCCTGCCGTTCGACCGCGCGATGCTCGACCAGTTGC
TCGATCTGGCCGTCGGGGGCTGCGCGCGGCTGACCGAGGTCCAGCGGGCGGCGCTGGCGGGCCCGCGCCCGGTACCCGCC
GGCGGAGCGCGACCGGGTACCCGGTGA

Protein sequence :
MRRSDGRTSGELRPVNITRGWQDHAEGSALIEFGRTRVLCAASVTEGVPRWRKGSGLGWVTAEYSMLPRATNTRNDRESV
RGRIGGRTHEISRLIGRSLRTCIDLKILGENTIAIDCDVLVADGGTRTASITGAYVALSDACGWLGRPDALIRSVAAVSV
GVVAGRPLLDLAYDEDSGADTDMNVICTGDGGFVEVQGTAEGLPFDRAMLDQLLDLAVGGCARLTEVQRAALAGPRPVPA
GGARPGTR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
rph YP_001800860.1 ribonuclease PH Not tested Not named Protein 1e-53 56