Gene Information

Name : Lacal_0860 (Lacal_0860)
Accession : YP_004579136.1
Strain : Lacinutrix sp. 5H-3-7-4
Genome accession: NC_015638
Putative virulence/resistance : Resistance
Product : cystathionine gamma-lyase
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG0626
EC number : 4.4.1.1
Position : 995747 - 996886 bp
Length : 1140 bp
Strand : -
Note : KEGG: fbc:FB2170_07025 Cys/Met metabolism PLP-dependent enzyme superfamily protein; PFAM: Cys/Met metabolism, pyridoxal phosphate-dependent enzyme

DNA sequence : 
ATGAAATTTAATACAAAAACCATACATGGAAAACAGCAGCCAGATTTAGCATATGGTGCTGTAATGCCACCAATATATCA
AACTTCAACTTATGCACAATCTACACCTGGCGGACATAAGGGTTATGAGTACTCTAGATCTAAAAATCCAACACGAGACG
CTTTAGAAAATGCATTTGCAAGTATTGAAAATGGTGATTTTGGCTTGGCTTTTGGTTCTGGATTAGCTGCTATAGATGCG
GTATTAAAATTATTAAAATCTGGAGACGAAGTAATTTGTAATAATGATTTATATGGTGGCACATATAGGCTATTTACTTC
GGTTTTTAAAAACTTTGGCATTACATTTCATTTTGTAAATATGGATAATCCAGATGCCATTGAAGCTTATATTAACGATG
ACACAAAATTAATTTGGGTAGAAACACCTACAAATCCAATGTTAAATATTATAGATATTGAAGCTACAGCTACAATAGCT
AAAAAGCATAATATATTATTGGCGGTAGATAATACCTTTGCAACACCATATTTGCAACAACCTTTAGATCTTGGAGCAGA
TATTGTTATGCATTCTGTAACAAAATATATTGGAGGACATAGCGATTTAGTTATGGGAGCATTAATAGTAAAAGAAAAAT
CACTTGCAGAAAGATTGTATTTTATACAAAATGCAAGTGGAGCAATTTGTGGTCCACAAGATGCTTTTTTAGCGCTTCGC
GGAATAAAAACACTACACGTTAGAATGCAACGTCATTGTGAAAATGGTAAAGCTATAGCACTGTATTTAGCGTCACATCC
CAAAGTAGAAAATGTATATTGGCCAGGATTTGAAAGTCACCCTAATCATGATATAGCAAAAAAACAAATGAAGGATTTTG
GAGGCATGATATCTTTTACAACAAAAGGGAATGATTATAATACGTCTATAAAACTTATAGAAAATCTTAAAATTTTCACT
TTGGCAGAGTCTCTTGGTGGTGTAGAGTCTTTAGCAGGACATCCTGCAAGCATGACGCATGCTAGCATACCAAAAGAAGA
ACGCGAAAAAACAGGTGTTGTAGATTCTTTAATTAGGTTGAGCGTTGGTATAGAAGATGAAGAAGATTTAATTAATGATT
TAAAACAAGCATTAGGGTAA

Protein sequence : 
MKFNTKTIHGKQQPDLAYGAVMPPIYQTSTYAQSTPGGHKGYEYSRSKNPTRDALENAFASIENGDFGLAFGSGLAAIDA
VLKLLKSGDEVICNNDLYGGTYRLFTSVFKNFGITFHFVNMDNPDAIEAYINDDTKLIWVETPTNPMLNIIDIEATATIA
KKHNILLAVDNTFATPYLQQPLDLGADIVMHSVTKYIGGHSDLVMGALIVKEKSLAERLYFIQNASGAICGPQDAFLALR
GIKTLHVRMQRHCENGKAIALYLASHPKVENVYWPGFESHPNHDIAKKQMKDFGGMISFTTKGNDYNTSIKLIENLKIFT
LAESLGGVESLAGHPASMTHASIPKEEREKTGVVDSLIRLSVGIEDEEDLINDLKQALG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SAR0460 YP_039909.1 Cys/Met metabolism PLP-dependent enzyme Not tested vSa¥á Protein 2e-87 52
SAS0418 YP_042545.1 Cys/Met metabolism PLP-dependent enzyme Not tested vSa¥á Protein 2e-88 52
metB YP_281510.1 cystathionine beta-lyase Not tested Not named Protein 2e-64 44

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Lacal_0860 YP_004579136.1 cystathionine gamma-lyase BAC0207 Protein 3e-72 44