Gene Information

Name : Lacal_1391 (Lacal_1391)
Accession : YP_004579667.1
Strain : Lacinutrix sp. 5H-3-7-4
Genome accession: NC_015638
Putative virulence/resistance : Virulence
Product : phosphonate-transporting ATPase
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : 3.6.3.28
Position : 1584794 - 1585495 bp
Length : 702 bp
Strand : +
Note : PFAM: ABC transporter-like; KEGG: rbi:RB2501_03535 ABC transporter ATP-binding protein; SMART: ATPase, AAA+ type, core

DNA sequence : 
ATGCTAAAAATAAGCAAACTACATAAGTCTTATCCTATAGGAGACTCTAGCTTACATGTTTTAAAAGGAATTGATCTTTC
AGTAGAAAGTGGAGAGATGGTTGCCATTATGGGATCATCAGGATCAGGAAAATCTACACTATTAAATATAATTGGTATGT
TAGATGAAGCAGACGAAGGAGAATATATTTTAGACAATGTTCCAATTAAAAACCTTACAGAGAAAAAAGCAGCTATTTAC
CGTAATAAGTTTTTGGGTTTCATTTTTCAATCTTTTAATTTAATAAATTATAAAAACGCATTAGATAATGTTGCTTTGCC
ATTATACTATCAAGGTTTAAAACGTAAAGAGCGTATTGAAAAAGGGCTTTTTCACCTAGAAAAAGTAGGTTTAAAAGATT
GGGCAGAGCATTTGCCAAACGAGCTTTCTGGTGGACAAAAACAACGTGTAGCCATAGCTAGAGCATTAGCTGCAAATCCC
AAATTATTATTGGCAGATGAGCCAACAGGAGCTTTAGATACAAAGACGTCTCACGAAATAATGGACTTTATACAAACTTT
AAATGACGAAGGAAAAACCATTTTAATGGTAACCCATGAAGAAGACATAGCAAGTATGTGTAAACGTATTGTGAGGTTAA
AAGACGGTGTAATAATGGAAGACGCTTTTGTAGAACAAGTAAGAGCATCACAATATGTTTGA

Protein sequence : 
MLKISKLHKSYPIGDSSLHVLKGIDLSVESGEMVAIMGSSGSGKSTLLNIIGMLDEADEGEYILDNVPIKNLTEKKAAIY
RNKFLGFIFQSFNLINYKNALDNVALPLYYQGLKRKERIEKGLFHLEKVGLKDWAEHLPNELSGGQKQRVAIARALAANP
KLLLADEPTGALDTKTSHEIMDFIQTLNDEGKTILMVTHEEDIASMCKRIVRLKDGVIMEDAFVEQVRASQYV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-31 42
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-32 42
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 1e-32 42
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-32 42
Spaf_1862 YP_006310627.1 amino acid ABC transporter ATP-binding protein Not tested FWisland_2 Protein 9e-32 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Lacal_1391 YP_004579667.1 phosphonate-transporting ATPase NC_012469.1.7686878. Protein 4e-52 55
Lacal_1391 YP_004579667.1 phosphonate-transporting ATPase NC_008702.1.4606598. Protein 3e-40 44
Lacal_1391 YP_004579667.1 phosphonate-transporting ATPase CP001581.1.gene798.p Protein 7e-36 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Lacal_1391 YP_004579667.1 phosphonate-transporting ATPase VFG0869 Protein 6e-23 41