Gene Information

Name : Lacal_1223 (Lacal_1223)
Accession : YP_004579499.1
Strain : Lacinutrix sp. 5H-3-7-4
Genome accession: NC_015638
Putative virulence/resistance : Unknown
Product : single-strand binding protein
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG0629
EC number : -
Position : 1416103 - 1416540 bp
Length : 438 bp
Strand : +
Note : KEGG: fbc:FB2170_07474 single-strand binding protein; TIGRFAM: Single-strand DNA-binding; PFAM: Primosome PriB/single-strand DNA-binding

DNA sequence :
ATGTCAGGAACATTAAATAAAGTTATGCTAATTGGGCATTTGGGAGATGAAGTAAAGATGCATTATTTTGAAGGTGGTGG
ATGTGTTGGCCGTTTTCCGTTGGCAACAAACGAAACCTATACAAATAAGTCTACTAACGAGCGTGTAACAAATACCGAAT
GGCATAATATTGTATTAAGAAATAAAGCGGCCGAAATTTGTGAAAAATACTTAAGCAAAGGCGATAAAGTATATATAGAA
GGCCGTTTAAAAACTAGAAAGTGGCAAGATGAGTCTGGAAACGATCGTTACAGTACAGAAATTCAAGCTAACGAATTTAC
TTTTTTAACAACAAAAAAAGAAAGTGAAGCAGCAAGTGCAAATGCACAAGCCAAACCAGAAGTAGCCAAACCAACAACTC
CAGGTAAAGCGGCAAGTGATGACGATTTACCTTTTTAA

Protein sequence :
MSGTLNKVMLIGHLGDEVKMHYFEGGGCVGRFPLATNETYTNKSTNERVTNTEWHNIVLRNKAAEICEKYLSKGDKVYIE
GRLKTRKWQDESGNDRYSTEIQANEFTFLTTKKESEAASANAQAKPEVAKPTTPGKAASDDDLPF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ssb1 YP_005176252.1 single-stranded DNA-binding protein Not tested ICEPmu1 Protein 7e-27 41