Gene Information

Name : Lacal_0114 (Lacal_0114)
Accession : YP_004578395.1
Strain : Lacinutrix sp. 5H-3-7-4
Genome accession: NC_015638
Putative virulence/resistance : Virulence
Product : N-acetylneuraminate synthase
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG2089
EC number : -
Position : 124134 - 125177 bp
Length : 1044 bp
Strand : -
Note : KEGG: fps:FP1256 sialic acid synthase (N-acetylneuraminic acid synthetase); TIGRFAM: N-acetylneuraminate synthase; PFAM: N-acetylneuraminic acid synthase, N-terminal; SAF domain

DNA sequence : 
ATGAGTAATCCATATATAGAAATAGCAGGTAGAAAAGTAGGGCAAGATTTTCCGCCATTAGTCATTGCCGAAATAGGTAT
TAACCATGAAGGGTCTTTACAAGTAGCAAAAGACATGGTAGATGCGGCGCATCGTGCAGGCGTTGAGGTAGTAAAACACC
AAACCCATATTGTAGCTGATGAAATGAGTGGTGCTGCAAAACAAGTTATTCCAGGTAATGCCGACGTTTCAATATATGAT
ATTATGGAGCGTTGCTCATTAAATGAAGCCGATGAATTAGCGCTTAAAAATTATGTGGAATCTAAAGGGATGATTTTTAT
TTCTACACCATTTTCTAGAGCAGCAGCAGAGCGTTTAAAACGTTTTGATATTCCTGCCTATAAAATAGGCTCTGGTGAAT
GTAATAATTATCCATTATTAGAACACATTGCGCAATTTGGTAAACCTATTATTTTAAGTACTGGTATGAATACGATTGCT
AGTGTAAAAAAAGCAGTCGCTATTTTCGATAAATATAAAGTGCCAGTCGCCTTATTACATACTACCAATTTATATCCCAC
ACCAACACATTTGGTACGTTTTGGAGCGATGGTGGAATTACACGAGGCTTTTCCTGATAAGGTTTTTGGATTGAGTGATC
ATACCTTAAATAACAATGCGTGTTTAGGTGCAGTAGCATTAGGAGGTTCCATTTTAGAACGTCATTTTACAGATCACATG
CAACGTACAGGACCAGATATTGTATGTAGTATGGATGAGCAAGCTTGTAAAGCTCTTATTACAAATAGTGCTGAAATGGC
ATTAATGCGAGGCGGCACTAAAGCACCAGCAAAAGAAGAGCAAGTGACTATAGATTTTGCTTTTGCAACGGTATGTACTA
TAAAACCTATTGCAGAAGGAGAACTCTATACTAAAGATAATATTTGGGTAAAACGACCAGGAACAGGCGCGATTTTAGCC
GATAAGTTTGATAGTATTTTAGGTAAAAAAGCAACGAGATCTATAGCAAATGATGAACAATTAACTTGGGCCGATATTGA
GTAA

Protein sequence : 
MSNPYIEIAGRKVGQDFPPLVIAEIGINHEGSLQVAKDMVDAAHRAGVEVVKHQTHIVADEMSGAAKQVIPGNADVSIYD
IMERCSLNEADELALKNYVESKGMIFISTPFSRAAAERLKRFDIPAYKIGSGECNNYPLLEHIAQFGKPIILSTGMNTIA
SVKKAVAIFDKYKVPVALLHTTNLYPTPTHLVRFGAMVELHEAFPDKVFGLSDHTLNNNACLGAVALGGSILERHFTDHM
QRTGPDIVCSMDEQACKALITNSAEMALMRGGTKAPAKEEQVTIDFAFATVCTIKPIAEGELYTKDNIWVKRPGTGAILA
DKFDSILGKKATRSIANDEQLTWADIE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
siaC NP_273132.1 polysialic acid capsule biosynthesis protein SiaC Not tested IHT-A Protein 2e-99 65

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Lacal_0114 YP_004578395.1 N-acetylneuraminate synthase VFG0252 Protein 9e-100 65