Gene Information

Name : Lacal_1101 (Lacal_1101)
Accession : YP_004579377.1
Strain : Lacinutrix sp. 5H-3-7-4
Genome accession: NC_015638
Putative virulence/resistance : Unknown
Product : Fe(3+)-transporting ATPase
Function : -
COG functional category : R : General function prediction only
COG ID : COG1123
EC number : 3.6.3.24
Position : 1269934 - 1271619 bp
Length : 1686 bp
Strand : -
Note : PFAM: ABC transporter-like; Oligopeptide/dipeptide ABC transporter, C-terminal; KEGG: cat:CA2559_03560 ABC-type dipeptide transport system, ATPase component; SMART: ATPase, AAA+ type, core

DNA sequence :
ATGAGTACTCTACTAACAGTAAATAATCTTTCAATTTCTTTTATTAATAATAAAAAAGAGAATGAAATTATCCATGGTAT
TACTTACCAACTAAATGCTAATGAAATTTTAGGAATTGTTGGAGAATCTGGTTCTGGAAAATCTGTTTCTACAGCTGCAA
TATTAGGGTTATTACCTAAAAAGATTTCTAAAATCACTTCTGGAAGTATTATTTTTCAAGGTGAAGATTTAACCAAAATA
ACAGCTAAAGCTTTTCAAGAAATAAGAGGAAAAAAAATTGGTATGATTTTTCAAGAACCAATGAGTGCTTTAAATCCTTC
TATGACTTGTGGCAAACAGGTTGAAGAAATTTTAAATATACATACAACTTTATCAAAAAAAGAGATTACAAACCAAACCC
TTTTGTTATTTAGTAAGGTAAAGTTGCCAAATCCTGATCGCGTGTTTAAAGCTTATCCTCATGAAATTTCTGGAGGACAA
AAACAACGTGTAATGATTGCAATGGCTATTGCTTGTAAACCACAAATTTTAATTGCAGATGAACCTACCACTGCGCTAGA
CGTTACTGTACAGAATGAGATAATAGCTTTACTAAAAGAATTGCAAGAAGAAACTAAAATGAGTATTCTGTTTATAACTC
ACGATTTATCATTAATCTCCCAAATTGCAAATCGGGTTTTAGTAATGTATAAGGGAGATATTGTTGAGCAGAATACGGTT
TCAAACATTTTTAATAATCCAGAACATAAATACACAAAAGCTTTAATTAATTCTAGACCTTCTTTAAATACCAGGTTAAA
AACGTTACCTACTATTAAGGATGTTATGAATAATAGTGTCGATTCCCAAATAATAACTGCAGGTATGCGTGCAGAACAAC
ATAGTAAAATATACAGTAATGAGCCTTTACTTGAGGTTAAAAATCTAGAAAAAGAATATGTTGGGAAATCTGGTTTATTT
TCTAAAGCTGAAATATTTAAGGCAGTAAATAATGTTACTTTTAATTTATATGAAGGTGAAACACTAGGTTTAGTAGGAGA
ATCTGGTTGCGGAAAATCTACATTAGGAAATGCTATTTTATTGTTAGACAGGCCAACTGCCGGATCTATATTATTTAAAG
GAAAAGATATTACAACTTTAAATACTAAAGAAGTAAAAACACTTAGAAAAGAAATACAAATAATATTTCAAGATCCATAC
TCTTCTCTAAATCCAAGACTAACTATTGGTGAAGCTATAATGGAACCCATGAAAGTTCATAAATTATTTACCACATATAG
TAAAAGAAAAGAAAAAGCCATAGAGATATTAAACAGGGTTGGCTTAGATAATTCACATTTTAATAGGTATCCACATGAAT
TTTCTGGTGGACAACGCCAGCGTGTTGGTATAGCAAGAACTGTTGCCTTACAACCCAAATTAATTATATGCGATGAATCT
GTATCTGCTTTAGATATTTCTGTTCAAGCACAGGTTTTAAATTTACTAAACGAATTAAAAGAGAAATTTGGATTTACTTA
TATCTTTATTTCTCATGATTTAGCTGTGGTTAAATATATGAGTGATCAATTATTGGTAATGAATAAAGGAAAAATAGAAG
AGTTAGATGATGCTGATGTTATTTACAAGTCACCTAAAAAAGCGTATACTAAAAAACTAATTAATGCTATACCAAAAGGT
TTATAG

Protein sequence :
MSTLLTVNNLSISFINNKKENEIIHGITYQLNANEILGIVGESGSGKSVSTAAILGLLPKKISKITSGSIIFQGEDLTKI
TAKAFQEIRGKKIGMIFQEPMSALNPSMTCGKQVEEILNIHTTLSKKEITNQTLLLFSKVKLPNPDRVFKAYPHEISGGQ
KQRVMIAMAIACKPQILIADEPTTALDVTVQNEIIALLKELQEETKMSILFITHDLSLISQIANRVLVMYKGDIVEQNTV
SNIFNNPEHKYTKALINSRPSLNTRLKTLPTIKDVMNNSVDSQIITAGMRAEQHSKIYSNEPLLEVKNLEKEYVGKSGLF
SKAEIFKAVNNVTFNLYEGETLGLVGESGCGKSTLGNAILLLDRPTAGSILFKGKDITTLNTKEVKTLRKEIQIIFQDPY
SSLNPRLTIGEAIMEPMKVHKLFTTYSKRKEKAIEILNRVGLDNSHFNRYPHEFSGGQRQRVGIARTVALQPKLIICDES
VSALDISVQAQVLNLLNELKEKFGFTYIFISHDLAVVKYMSDQLLVMNKGKIEELDDADVIYKSPKKAYTKKLINAIPKG
L

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
dppD YP_005160017.1 putative peptide ABC transport system ATP-binding protein Not tested Not named Protein 2e-105 41