Gene Information

Name : Metok_0584 (Metok_0584)
Accession : YP_004576342.1
Strain : Methanothermococcus okinawensis IH1
Genome accession: NC_015636
Putative virulence/resistance : Unknown
Product : Pyridoxal biosynthesis lyase pdxS
Function : -
COG functional category : H : Coenzyme transport and metabolism
COG ID : COG0214
EC number : -
Position : 594807 - 595706 bp
Length : 900 bp
Strand : -
Note : TIGRFAM: Vitamin B6 biosynthesis protein; HAMAP: Pyridoxal biosynthesis lyase pdxS; KEGG: mmz:MmarC7_1102 pyridoxal biosynthesis lyase PdxS; PFAM: Vitamin B6 biosynthesis protein

DNA sequence :
ATGAAAAAAGTTGGAACAGACATTTTAAAAAGAGGATTTGCAAAAATGGTAAAACATGGCGTTGTGATGGATGTTACAAA
TGTTGAACAGGCTCAGATTGCTGAGGAAGCAGGAGCTACTGCGGTAATGGCTTTGGAAAGAGTCCCAGCAGATATAAGAG
CTCAGGGTGGAGTGGCAAGAATGTCAGACCCTGAAATGATATTGGAAATAAAGGATGCTGTATCAATTCCTGTAATGGCT
AAGGCAAGAATAGGTCATTTTGTTGAAGCACAGGTTTTAGAGGCAATCGGCGTTGATATGATTGATGAGAGTGAGGTATT
AACTCCTGCTGATGATGTAAATCATATCGATAAAAAAGCATTTAAAGTTCCATTTGTATGCGGTGCAAGAAATCTTGGAG
AGGCTTTAAGGAGAATAGATGAAGGAGCTGCAATGATAAGGACAAAAGGGGAAGCAGGAACAGGAAATGTTGTTGAAGCT
GTAAAACACATGAGAGCTGTAAATGAAGGTATTGCAAGAGTTGTTGGATATTATGAAATGGGACTTGATAGGGAGCTCGT
CCAAATGGCAAGAAATGAATTGAAAGTTCCATTAGATTTGGTATATGAAGTGGCAAAATTAAAAAGATTACCCGTGGTTA
ATTTCGCAGCAGGAGGTATTGCAACACCAGCAGATGCTGCATTGATGATGCAAATGGGATGTGACGGTGTATTTGTAGGT
TCAGGCATTTTCAAATCAGGAAATCCAGCAGAGAGAGCAAAAGCTATTGTTGAAGCAACATACAACTATGATAAACCTGA
TGTAGTGGCAGAAGTAAGTAAAAACCTTGGAGAGGCAATGGTTGGAATTAACATTGAAGACATTCCTGAGAAGGAGCTCC
TTGCAAAAAGAGGGGATTAA

Protein sequence :
MKKVGTDILKRGFAKMVKHGVVMDVTNVEQAQIAEEAGATAVMALERVPADIRAQGGVARMSDPEMILEIKDAVSIPVMA
KARIGHFVEAQVLEAIGVDMIDESEVLTPADDVNHIDKKAFKVPFVCGARNLGEALRRIDEGAAMIRTKGEAGTGNVVEA
VKHMRAVNEGIARVVGYYEMGLDRELVQMARNELKVPLDLVYEVAKLKRLPVVNFAAGGIATPADAALMMQMGCDGVFVG
SGIFKSGNPAERAKAIVEATYNYDKPDVVAEVSKNLGEAMVGINIEDIPEKELLAKRGD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
DIP0227 NP_938620.1 pyridoxal biosynthesis lyase PdxS Not tested Not named Protein 2e-80 69
pdxS YP_005141805.1 pyridoxine biosynthesis protein Not tested Not named Protein 3e-80 69
pdxS YP_005137204.1 pyridoxine biosynthesis protein Not tested Not named Protein 3e-80 68