Gene Information

Name : MLP_24800 (MLP_24800)
Accession : YP_004572897.1
Strain : Microlunatus phosphovorus NM-1
Genome accession: NC_015635
Putative virulence/resistance : Virulence
Product : metal ABC transporter permease
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1108
EC number : -
Position : 2657413 - 2658285 bp
Length : 873 bp
Strand : +
Note : -

DNA sequence : 
ATGAGTCCGCTCGACTGGATCCTGGAGCCGCTGCGCTACGACTTCATGATCAACGCCTTGGTCGCCACCGTGGTCGCTGC
CGTCGTCTGCGGGCTGCTGTCCTGCTGGCTCGTCCTGGTCGGCTGGTCGCTGATCGGGGACGCGGTCTCCCACGCGGTGT
TGCCCGGTGTGGTGCTCGCGTATGTGGTCGGAGCGCCGTTCGCCCTCGGCGCCCTGGTCTTCGGATTCCTTGCCGTCGGG
TTGATCGGCGTGCTCCGCGATACCAGCCGGGTCAAGGAGGACGCCGCGATCGGGATCGTGTTCACGACGCTGTTCGCGTT
CGGTCTGGTACTGATCTCGATCACACCCAGCCAGACCGACCTCAACCACATCATCTTCGGCAATGTCTTGGGGGTGTCGA
CCAGCGACCTGGTGCAGGTCTTGATCCTGGCGGCCGTTGCGTTCGTCGTGGTGCTGATCAAGCGTCGTGATCTCACCCTG
TACGCCTTCGATCCCGCCCATGCGTACGCGATCGGGCTCAATCCCCGGCTGATCGGCGCCCTGCTGTTGGGACTGCTCGC
GCTCACTGCCGTTGTGGCGCTGCAGGTGGTCGGGGTGGTCCTGGTCGTCGCCCTGCTCATCATCCCCGGTGCCACTGCTC
AGCTGCTCACCGATCGGTTCGGCCGGATGCTGATCATCGCGCCGGCCGCAGCCATACTTGCCTCCGTGGCCGGCATCTAC
CTCAGCTACTGGCTCGACGCCTCGCCCGGTGGTCTCGTCGTGGTCGTGCAAGGCCTGATGTTCGCCGGCGTCTACCTGGC
CAGCCCGCGGCACGGCCTGATCAGCCGCCGACTGCAGCGGCGGCGAGCCGGCGCGCTGGCCACCGGGGCCTGA

Protein sequence : 
MSPLDWILEPLRYDFMINALVATVVAAVVCGLLSCWLVLVGWSLIGDAVSHAVLPGVVLAYVVGAPFALGALVFGFLAVG
LIGVLRDTSRVKEDAAIGIVFTTLFAFGLVLISITPSQTDLNHIIFGNVLGVSTSDLVQVLILAAVAFVVVLIKRRDLTL
YAFDPAHAYAIGLNPRLIGALLLGLLALTAVVALQVVGVVLVVALLIIPGATAQLLTDRFGRMLIIAPAAAILASVAGIY
LSYWLDASPGGLVVVVQGLMFAGVYLASPRHGLISRRLQRRRAGALATGA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sitD YP_217784.1 iron transporter: fur regulated Virulence SPI-1 Protein 1e-34 48
sitD NP_457258.1 Iron transport protein, inner membrane component Virulence SPI-1 Protein 1e-34 48
sitD NP_806467.1 iron transporter inner membrane protein Virulence SPI-1 Protein 1e-34 48
sitD AAD41068.1 SitD Virulence centisome 63 pathogenicity island Protein 2e-34 47
sitD NP_461785.1 permease Virulence SPI-1 Protein 3e-34 47
sitC NP_461784.1 permease Virulence SPI-1 Protein 1e-34 46
sitC AAD41067.1 SitC Virulence centisome 63 pathogenicity island Protein 1e-34 46
sitC NP_457257.1 Iron transport protein, inner membrane component Virulence SPI-1 Protein 1e-34 46
sitC NP_806466.1 iron transporter inner membrane protein Virulence SPI-1 Protein 1e-34 46
sitC YP_217783.1 iron transporter: fur regulated Virulence SPI-1 Protein 1e-34 46

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
MLP_24800 YP_004572897.1 metal ABC transporter permease BAC0442 Protein 9e-32 50
MLP_24800 YP_004572897.1 metal ABC transporter permease BAC0352 Protein 1e-34 47
MLP_24800 YP_004572897.1 metal ABC transporter permease BAC0351 Protein 7e-35 46
MLP_24800 YP_004572897.1 metal ABC transporter permease BAC0441 Protein 2e-31 45

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
MLP_24800 YP_004572897.1 metal ABC transporter permease VFG0528 Protein 1e-34 47
MLP_24800 YP_004572897.1 metal ABC transporter permease VFG0527 Protein 6e-35 46