Gene Information

Name : BCO26_0065 (BCO26_0065)
Accession : YP_004567510.1
Strain : Bacillus coagulans 2-6
Genome accession: NC_015634
Putative virulence/resistance : Virulence
Product : lysyl-tRNA synthetase
Function : -
COG functional category : J : Translation, ribosomal structure and biogenesis
COG ID : COG1190
EC number : -
Position : 66475 - 67962 bp
Length : 1488 bp
Strand : +
Note : PFAM: tRNA-synt_2; tRNA_anti

DNA sequence :
ATGAGTGGCGAAAATATAAATGAACAGTATCTGGTCCGGAAAGAAAAAATGGAGGCGCTCCGCGAAAAAGGGGTGGACCC
GTTCGGCAAGCGTTTTGAACGGACAACCGACACGGAAGAATTAAAACAAAAATACGGCGAATGCACGGAAGAACAACTGG
AAGAAAAAGAGATTCCAGTTGCCATTGCCGGGCGGATCATGACAAAACGGCGGAAAGGAAGGGCCGGGTTTGCTCATATC
CAGGACTTGAAAGGGCAAATCCAGTTTTATATTCGCCAGGACGCAGTCGGCGAAGAACAGTACGAGTTATTCAAAAGCAC
GGACCTTGGCGACATTGTCGGGCTTAAAGGCACGGTTTTCCGGACAAAAGTGGGCGAATTGTCCGTCAAAGTCAAAGAAT
TTATTCTGTTAACAAAAGCGCTGCGCCCGTTGCCGGATAAATTCCACGGCCTGCGGGACATCGAGCAGCGGTACCGTCAG
CGTTATCTCGACCTGATTATGAGTGAAGAAAGTAAAAACACGTTCATTACAAGAAGCCGCATTATCCAGTCCATCCGCAA
TTATTTGGACAAGAACGGCTATTTGGAAGTCGAAACGCCAATGATGCATGCCATTGCAGGTGGGGCGGCTGCACGGCCGT
TTATCACCCATCACAATGCGCTCGATATCGACCTTTATATGCGGATTGCGATTGAACTCCACCTGAAACGGTTGATTGTC
GGCGGGTTGGAAAAAGTCTATGAAATCGGCCGCGTTTTCCGCAATGAAGGAATCGATACCCGCCATAACCCGGAATTCAC
GATGCTTGAGCTGTACGAAGCATATGCGGATTTTAACGATATTATGCAGCTGACTGAAAACATGATTGTGCACACAGCAA
AAGAAGTACTCGGCACCACCGCCATCCGGTACGGCGAACATGAAGTAAATCTTGAACCGGAATGGCGCCGCCTGCATATG
GTCGATGCAATTAAAGAATATACGGGCGTCGACTTCTGGAATGTGACAAGCACCGAAGAAGCAAGGGCACTTGCAAAAGA
ACACCATATTGAAATCACGGAACATATGGAATACGGGCATATCGTCAATGAATTTTTCGAGCAAAGGGTAGAAGAAAAAC
TGATCCAGCCGACTTTCGTTTACGGGCACCCGGTCGAAATCTCGCCGCTTGCTAGAAAAAATGAAAAAGACCCGCGGTTT
ACAGACCGGTTTGAACTGTTCATTGTCGGCCGTGAACATGCCAATGCCTTCACCGAACTGAATGACCCGATCGACCAGCG
CGAACGTTTCGTGAACCAGCTGAAAGAGCGCGAGCAGGGGAATGACGAAGCGCACCAAATGGATGAAGACTTTATTGAAG
CATTGGAATACGGCATGCCGCCAACAGGAGGACTCGGCATCGGCGTTGACCGGCTTGTCATGTTGCTGACCAATGCCCCG
TCTATCCGGGACGTGCTGCTCTTCCCATTAATGAAAAGCAGGGATTAA

Protein sequence :
MSGENINEQYLVRKEKMEALREKGVDPFGKRFERTTDTEELKQKYGECTEEQLEEKEIPVAIAGRIMTKRRKGRAGFAHI
QDLKGQIQFYIRQDAVGEEQYELFKSTDLGDIVGLKGTVFRTKVGELSVKVKEFILLTKALRPLPDKFHGLRDIEQRYRQ
RYLDLIMSEESKNTFITRSRIIQSIRNYLDKNGYLEVETPMMHAIAGGAAARPFITHHNALDIDLYMRIAIELHLKRLIV
GGLEKVYEIGRVFRNEGIDTRHNPEFTMLELYEAYADFNDIMQLTENMIVHTAKEVLGTTAIRYGEHEVNLEPEWRRLHM
VDAIKEYTGVDFWNVTSTEEARALAKEHHIEITEHMEYGHIVNEFFEQRVEEKLIQPTFVYGHPVEISPLARKNEKDPRF
TDRFELFIVGREHANAFTELNDPIDQRERFVNQLKEREQGNDEAHQMDEDFIEALEYGMPPTGGLGIGVDRLVMLLTNAP
SIRDVLLFPLMKSRD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD66193.1 putative lysil-tRNA synthetase LysU Not tested PAI III 536 Protein 3e-123 52
lysS YP_005163386.1 lysyl-tRNA synthetase Not tested Not named Protein 1e-91 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
BCO26_0065 YP_004567510.1 lysyl-tRNA synthetase VFG1668 Protein 2e-123 52