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Name : hsdM (BCO26_2939) Accession : YP_004570381.1 Strain : Bacillus coagulans 2-6 Genome accession: NC_015634 Putative virulence/resistance : Unknown Product : type I restriction-modification system DNA methylase Function : - COG functional category : V : Defense mechanisms COG ID : COG0286 EC number : - Position : 3035352 - 3036872 bp Length : 1521 bp Strand : - Note : PFAM: N6_Mtase; HsdM_N DNA sequence : ATGATGGAAACAGCAAAGATTGGATTCGAAGAAACACTTTGGAAATCTGCTGACAAATTACGTGGAAGCATGGATGCATC CGAATATAAACACGTAGTCTTAGGATTGATTTTCTTAAAATACATTTCTGATAAGTTTGAAATGAAGTATAACGAGTTAG TTGAAGAAGGAGAAGGTTTTGAAGAAGACCGCGATGAATATACAGCAGAGAATATTTTCTGGGTACCGAAACAGTCACGT TGGAGCTTCATTAAAGACCGTGCGAAAGACCCGAAAATCGGTCAATATATTGATGAAGCGATGATTGAAATTGAAAAAGA AAACCCGTCACTCAGAGGTGTGTTAGATAAACGTTATGCCCGCCCTGAGATTGATAAACGCCGATTAGGAGAACTGATAG ACCTCATTTCAACCATTAAATTGCACAGCAAACAAGAAAAAGACTTACTTGGTCGAGTTTATGAATATTTCTTAGGTAAG TTTGCCAGTGCAGAAGGAAAAGGCGGTGGCGAGTTCTATACGCCACAAAGTGTTGTTAAAACATTGGTTGAAATGACTGA ACCTTATGAAGGGCGGATTTATGACCCTTGTTGTGGTAGTGGCGGCATGTTTGTTCAAAGTGAAAAGTTTGTTGAACGCC ATCAAGGAAAAATTGATAATCTCTCTATTTATGGTCAGGAACTCAATTCAACGACTTGGAAGCTTTGTAAAATGAATCTT GCTATCCGTGGAATAGAGGGGAATATCGGCGAACATCATGCGGATACGTTCCATAATGATTTACATAAAACGTTGAAAGC AGATTTCATCCTTGCCAATCCTCCATTCAATGTGAGTGACTGGGGCGGAAATGAATTAGTGGATGATGTTCGTTGGAAAT TCGGCACACCGCCAGCGAGCAATGCCAATTATGCATGGTTACAGCATATGATTTATCACCTTTCACCAAATGGCGCAGCT GGTATTGTATTAGCAAATGGTTCGTTAAGTTCCAATACATCGAATGAAGGGGAAATCCGTAAAAACATACTTGAAGCGGA TTTAGTCGATGCCATTGTTGCTTTGCCTGACAAATTATTCTATTCAACAGGAATACCAGTGAGCTTATGGATTTTAAACC GTAATAAGAAAAATCATCCTAAATACCGAAGCCGTGAACATGAAATTCTATTTATCGATGCCAGAAACTTAGGAAAAATG GTTGACCGCCGCCTGCGTGAATTAACAGAAGAAGATATTCAAAAAATTGCAGGAACATACCGAAACTGGCGTAAACCAGA TGGGAAATATGAAGACATCAAGGGATTCTGTAAATCAGTGACTTTAGAAGATGTCCGTCAAAATGACTATGTCTTAACGC CCGGACGCTATGTTGGAATAAGTGATGTCGAGGATGATGGTATACCATTTGAAGAAAAAATGGAAACTTTAACTGTAGAA TTAAGAGGGTTGTTCGATAAATCCCACCAACTAGAAGAAGAAATTAAGAAGAAATTAGGGGGAATTGGTTATGACTTCTA G Protein sequence : MMETAKIGFEETLWKSADKLRGSMDASEYKHVVLGLIFLKYISDKFEMKYNELVEEGEGFEEDRDEYTAENIFWVPKQSR WSFIKDRAKDPKIGQYIDEAMIEIEKENPSLRGVLDKRYARPEIDKRRLGELIDLISTIKLHSKQEKDLLGRVYEYFLGK FASAEGKGGGEFYTPQSVVKTLVEMTEPYEGRIYDPCCGSGGMFVQSEKFVERHQGKIDNLSIYGQELNSTTWKLCKMNL AIRGIEGNIGEHHADTFHNDLHKTLKADFILANPPFNVSDWGGNELVDDVRWKFGTPPASNANYAWLQHMIYHLSPNGAA GIVLANGSLSSNTSNEGEIRKNILEADLVDAIVALPDKLFYSTGIPVSLWILNRNKKNHPKYRSREHEILFIDARNLGKM VDRRLRELTEEDIQKIAGTYRNWRKPDGKYEDIKGFCKSVTLEDVRQNDYVLTPGRYVGISDVEDDGIPFEEKMETLTVE LRGLFDKSHQLEEEIKKKLGGIGYDF |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| hsdM | YP_251979.1 | type I restriction-modification system DNA methylase | Not tested | SCCmec | Protein | 6e-163 | 66 |
| hsdM | BAH57701.1 | type I restriction-modification system DNA methylase | Not tested | Type-VII SCCmec | Protein | 2e-163 | 65 |
| hsdM | BAD24842.1 | HsdM protein | Not tested | Type-V SCCmec | Protein | 7e-161 | 64 |
| api49 | CAF28523.1 | putative HsdM-like N-methyl transferase | Not tested | YAPI | Protein | 8e-115 | 47 |
