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Name : hsdR (BCO26_2937) Accession : YP_004570379.1 Strain : Bacillus coagulans 2-6 Genome accession: NC_015634 Putative virulence/resistance : Unknown Product : type I site-specific deoxyribonuclease Function : - COG functional category : V : Defense mechanisms COG ID : COG0610 EC number : - Position : 3030763 - 3034044 bp Length : 3282 bp Strand : - Note : PFAM: DUF3387; HSDR_N; ResIII DNA sequence : ATGTCATATCCCGTTTCGAAAGGGGAGAGGAGAATGAGTTTTTTAGAAAATTTTACGGAAGATAAGCTGGAAGAAGCAGC TATAGAAATTCTTCAGGAGCTTGGGTATGACTATGTCTTTGGTCCGGATATTAGTTGTGATGGGGAAAGACCGGAACGAA AAGATTATCGTACAGTTATTTTAGAAGACCGTGTAAAAGATGCTTTGTTTAAACATAATCGCCATTTGCCACAGGAAGCA ATAGAAGAAGCATTTCGGCAAATTATAGCTTTTAATAGTCCAAGCTTAGAAGAAAACAACCGTCATTTTCACAAATTAAT CACGGAAGGCATTGATGTGTCGTTTCATCAAGATGGTCTTAGCCGTTCGATGAAGGCATTCTTAATTGATTTTGAAGAAC CAGCTAAAAATGATTTTTTGGTAGTGAATCAGTTTACGGTCGTTGAAAAAGAAGAACGCCGCCCGGATTTAATTATTTTT ATCAATGGCATCCCATTCGTCGTTATCGAATTAAAATCAGCATCTGATGAAAATGTGAGTATCGATAATGCCTATGCACA GATTCAAACGTATAAACGTGATATTCCATCTTTATTTTATTATAATGCGTTTTGTATTTTATCTGATGGAATTAATGCGA AAGCGGGAACGATTACCGCAAGTCAAGAACGTTTTATGAATTGGCGGACGGTGGATGGGGAAAACATTGAGCCACTTGAA GTGCCGCAATATGAAGTGTTGTTAAGAGGGATGCTGGCAAAAGACCGGCTTATTGATATTATTGAAAACTTTATTCTCTT TCAGGAATCTAAAGAAGAAGAACGGGATGAAAATGGGAAGAAAATCGGCGAAAGAAAAACGATTGCCAAAATTCTCGCTG CCTATCACCAATATTTTGCGGTAAAAAAAGCGGTGGAAAAGACAAAAATAGCGACCAGTGAGAATGGAGACCGTAAAATC GGTGTTATATGGCATACACAAGGTTCGGGTAAAAGTTTTTCGATGGTTTTTTATACAGCACAGCTTGTCAAGCAGCTAAA TAATCCAACTATTGTAGTAATTACTGACCGCAACGATCTAGATGACCAGTTATTTTCGACATTTTCAAAATCAAAGGATA TTTTAAGACAAACACCGAAACAAGCAGATGTCCGCAAATTGAGTGAGGAACAGAAAAAACAACAGGCAAACGAAAAATCC AAAGAGATAAACGGATTATATGATCTTCTCAATGATCGAGAATCGGGCGGTATTATTTTTACAACGATTCAAAAATTCAA ACCAGAAGAAGGTGAAATGCCGGTTTTAACCGATCGTAAAAATGTGATTGTTATTGCGGATGAAGCTCATCGCAGTCAAT ATGGTTTTTCTGCAAAGACAGATACGAAAACAGGCGAAGTGAAATATGGATATGCAAAATATCTTCGCGATGCACTTCCA AATGCTTCCTTTATCGGTTTTACAGGAACACCGATTGAGCTGGAAGATAAGTCAACGCCCGCTGTTTTCGGTAATTATAT TGACATTTATGATATGACGCGAGCAGTTGAAGACAAAGCAACGGTTAAAATTTATTATGAAAACCGTATTATCCGCTTGG AAGCCAATGAAGAAGAATTAGCGAAGATCGATGAAGAATTTGAAGAGATTACCGAAGATCAGGAAGAATCAGTACGTGAA AAATACAAGTCCAAATGGTCGAGGCTCGAAGCCATCGTCGGTTCACCTAACCGCATCAAACAATTGGCAAAAGATATAGT CAATCATTACGAAGAAAAGGCAAAAGCAATTGACGGAAAAGCAATGATTGTTTGTATGAGTCGCCGTATTTGTGTCGCAC TTTATAACGAAATTGTCAAATTACGTCCAGACTGGCATTCCGATGATGACGACAAAGGTAAAATTAAAGTCGTCATGACA GGGAGTGCTGGGGATGATGATTTCTTACAGCCACATATTGGCGGTAAGAAACGCCGTGATTTATTGGCAAAAAGAATGAA AGACAATAGTGATGAACTAAAAATCGTCATTGTACGAGATATGTGGCTGACTGGATTTGACGTCCCTTCCATGCATACGA TGTATATCGATAAACCGATGAAGGGTCATAACCTCATGCAGGCAATCGCACGGGTTAACCGTGTATTTAAAGATAAATCA GGTGGAGTAGTTGTCGATTATATTGGGATTTTAGAAAGCTTAAAGAAAGCATTAAATCAATATACCGAAAGTGATAAGAA GACAACGGGTATTGATACTTCGGCCGCTGTCGCTGTGATGAAAGAGAAACTTGAAATTTTACAAGACATGATGCATGGGT TTGATTACTCTGCTTATATGGGTTCATCCCAAGCAGGCCGCATTCGTGCCATCACGGGCGGAATGAATGTCATTTTTGGT AAGAGTGAAAAAGAACAAAAAGAATTCAAAAAGACGGCAACCGAGCTAGCGAAGGCGCATTCACTTTGTGCAGCGACAGA TGAAGGAAAAGCAGCAGCTCTTGAAGTCAGTTATTTTAAAGCAGTTAAGGCAAGCCTTAATAAACTTCAAGAAAAACAGC CGAAGCGGAAGACGAAAAAAGAAATCGAAGCCCGCGTGAATCAATTACTCGAACGTTCCATTATTTCAGAAGAAGTAGTG GATGTATTTGAAGTGATGGGATTGAAACATCCTGATGTATCTATATTATCGGAAGAATTTCTCGAAGAAGTACGTTCATA TGAGTATAAAAATTTGGCGGTTGAAATGCTAAAAAAATTACTTGAAGGCAACATCAAAACAATGGAAAGACGCAACCTTG TCAAATCCCAAAAATACTCGGAAAAACTGAAACAGTCGCTGAACAAATATAAAAACCAAGCCATTACAAACGCCGAAGTA ATCGAAGAACTAATTCAAATGGCAAAGGACATGAAAAAAGAACGAGAAGAAGAAAAAGATCTAGGATTAAATGAAGATGA AATTGCCTTTTACGATGCTTTAACATCTGAGTCTATAGTTAAAGAGTTAATGGAAGATGAAGTCTTACGTAAAATCGCCA ATGAACTGACTCAAGCAATTAGACGGAACATGACCATTGACTGGCATGTCCGAAAAAGCGCCCGTGCAGGAATGAGGAGA ATTATTAAGCGACTATTGAAGAAGTATGATTATCCACCAGAACAAGCGAAAAAAGCTTTAGACACAGTTATGCGACAAGC AGAGTTAATGGCGGAGCATACTGAAGTAAGAGATTGGAATACGCTACAGGCTGCGGAGTCTAAAGGTGAATATAGGATAT AA Protein sequence : MSYPVSKGERRMSFLENFTEDKLEEAAIEILQELGYDYVFGPDISCDGERPERKDYRTVILEDRVKDALFKHNRHLPQEA IEEAFRQIIAFNSPSLEENNRHFHKLITEGIDVSFHQDGLSRSMKAFLIDFEEPAKNDFLVVNQFTVVEKEERRPDLIIF INGIPFVVIELKSASDENVSIDNAYAQIQTYKRDIPSLFYYNAFCILSDGINAKAGTITASQERFMNWRTVDGENIEPLE VPQYEVLLRGMLAKDRLIDIIENFILFQESKEEERDENGKKIGERKTIAKILAAYHQYFAVKKAVEKTKIATSENGDRKI GVIWHTQGSGKSFSMVFYTAQLVKQLNNPTIVVITDRNDLDDQLFSTFSKSKDILRQTPKQADVRKLSEEQKKQQANEKS KEINGLYDLLNDRESGGIIFTTIQKFKPEEGEMPVLTDRKNVIVIADEAHRSQYGFSAKTDTKTGEVKYGYAKYLRDALP NASFIGFTGTPIELEDKSTPAVFGNYIDIYDMTRAVEDKATVKIYYENRIIRLEANEEELAKIDEEFEEITEDQEESVRE KYKSKWSRLEAIVGSPNRIKQLAKDIVNHYEEKAKAIDGKAMIVCMSRRICVALYNEIVKLRPDWHSDDDDKGKIKVVMT GSAGDDDFLQPHIGGKKRRDLLAKRMKDNSDELKIVIVRDMWLTGFDVPSMHTMYIDKPMKGHNLMQAIARVNRVFKDKS GGVVVDYIGILESLKKALNQYTESDKKTTGIDTSAAVAVMKEKLEILQDMMHGFDYSAYMGSSQAGRIRAITGGMNVIFG KSEKEQKEFKKTATELAKAHSLCAATDEGKAAALEVSYFKAVKASLNKLQEKQPKRKTKKEIEARVNQLLERSIISEEVV DVFEVMGLKHPDVSILSEEFLEEVRSYEYKNLAVEMLKKLLEGNIKTMERRNLVKSQKYSEKLKQSLNKYKNQAITNAEV IEELIQMAKDMKKEREEEKDLGLNEDEIAFYDALTSESIVKELMEDEVLRKIANELTQAIRRNMTIDWHVRKSARAGMRR IIKRLLKKYDYPPEQAKKALDTVMRQAELMAEHTEVRDWNTLQAAESKGEYRI |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| hsdR | BAD24840.1 | type I restriction-modification system endonuclease homologue | Not tested | Type-V SCCmec | Protein | 0.0 | 53 |
| hsdR | YP_251977.1 | type I restriction-modification system restriction subunit | Not tested | SCCmec | Protein | 0.0 | 53 |
| hsdR | BAH57699.1 | type I restriction-modification system endonuclease homologue | Not tested | Type-VII SCCmec | Protein | 0.0 | 53 |
| api52 | CAF28526.1 | hsdr-like Type I restriction enzyme | Not tested | YAPI | Protein | 0.0 | 48 |
